Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8741 | 26446;26447;26448 | chr2:178714553;178714552;178714551 | chr2:179579280;179579279;179579278 |
N2AB | 8424 | 25495;25496;25497 | chr2:178714553;178714552;178714551 | chr2:179579280;179579279;179579278 |
N2A | 7497 | 22714;22715;22716 | chr2:178714553;178714552;178714551 | chr2:179579280;179579279;179579278 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs538959125 | 0.578 | 0.114 | D | 0.547 | 0.279 | 0.3691244813 | gnomAD-2.1.1 | 1.78299E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.53676E-03 | None | 0 | None | 0 | 0 | 0 |
K/E | rs538959125 | 0.578 | 0.114 | D | 0.547 | 0.279 | 0.3691244813 | gnomAD-3.1.2 | 9.2E-05 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 2.50675E-03 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs538959125 | 0.578 | 0.114 | D | 0.547 | 0.279 | 0.3691244813 | 1000 genomes | 3.99361E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 2E-03 | 0 | None | None | None | 0 | None |
K/E | rs538959125 | 0.578 | 0.114 | D | 0.547 | 0.279 | 0.3691244813 | gnomAD-4.0.0 | 3.2426E-05 | None | None | None | None | I | None | 0 | 1.68294E-05 | None | 0 | 1.03042E-03 | None | 0 | 0 | 0 | 0 | 8.06218E-05 |
K/Q | None | None | 0.269 | N | 0.568 | 0.344 | 0.248417906384 | gnomAD-4.0.0 | 6.89001E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.17583E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.455 | ambiguous | 0.6163 | pathogenic | -0.348 | Destabilizing | 0.221 | N | 0.552 | neutral | None | None | None | None | I |
K/C | 0.8249 | likely_pathogenic | 0.8855 | pathogenic | -0.487 | Destabilizing | 0.938 | D | 0.691 | prob.neutral | None | None | None | None | I |
K/D | 0.6255 | likely_pathogenic | 0.7548 | pathogenic | 0.433 | Stabilizing | 0.665 | D | 0.583 | neutral | None | None | None | None | I |
K/E | 0.2785 | likely_benign | 0.4112 | ambiguous | 0.513 | Stabilizing | 0.114 | N | 0.547 | neutral | D | 0.523919986 | None | None | I |
K/F | 0.7729 | likely_pathogenic | 0.8797 | pathogenic | -0.254 | Destabilizing | 0.616 | D | 0.683 | prob.neutral | None | None | None | None | I |
K/G | 0.5163 | ambiguous | 0.6658 | pathogenic | -0.633 | Destabilizing | 0.361 | N | 0.555 | neutral | None | None | None | None | I |
K/H | 0.3509 | ambiguous | 0.4387 | ambiguous | -0.769 | Destabilizing | 0.95 | D | 0.623 | neutral | None | None | None | None | I |
K/I | 0.4344 | ambiguous | 0.6108 | pathogenic | 0.355 | Stabilizing | 0.028 | N | 0.691 | prob.neutral | None | None | None | None | I |
K/L | 0.4201 | ambiguous | 0.5692 | pathogenic | 0.355 | Stabilizing | 0.008 | N | 0.555 | neutral | None | None | None | None | I |
K/M | 0.2667 | likely_benign | 0.3789 | ambiguous | 0.026 | Stabilizing | 0.578 | D | 0.616 | neutral | N | 0.521918201 | None | None | I |
K/N | 0.4307 | ambiguous | 0.5724 | pathogenic | -0.033 | Destabilizing | 0.6 | D | 0.551 | neutral | N | 0.498280537 | None | None | I |
K/P | 0.4643 | ambiguous | 0.5718 | pathogenic | 0.15 | Stabilizing | 0.801 | D | 0.641 | neutral | None | None | None | None | I |
K/Q | 0.169 | likely_benign | 0.2264 | benign | -0.088 | Destabilizing | 0.269 | N | 0.568 | neutral | N | 0.49224015 | None | None | I |
K/R | 0.1007 | likely_benign | 0.1153 | benign | -0.122 | Destabilizing | 0.002 | N | 0.307 | neutral | N | 0.493899218 | None | None | I |
K/S | 0.4949 | ambiguous | 0.6459 | pathogenic | -0.694 | Destabilizing | 0.221 | N | 0.545 | neutral | None | None | None | None | I |
K/T | 0.2517 | likely_benign | 0.3885 | ambiguous | -0.42 | Destabilizing | 0.001 | N | 0.327 | neutral | N | 0.500482583 | None | None | I |
K/V | 0.4317 | ambiguous | 0.5916 | pathogenic | 0.15 | Stabilizing | 0.037 | N | 0.529 | neutral | None | None | None | None | I |
K/W | 0.7882 | likely_pathogenic | 0.8742 | pathogenic | -0.172 | Destabilizing | 0.986 | D | 0.697 | prob.neutral | None | None | None | None | I |
K/Y | 0.5906 | likely_pathogenic | 0.7199 | pathogenic | 0.14 | Stabilizing | 0.158 | N | 0.673 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.