Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8742 | 26449;26450;26451 | chr2:178714550;178714549;178714548 | chr2:179579277;179579276;179579275 |
N2AB | 8425 | 25498;25499;25500 | chr2:178714550;178714549;178714548 | chr2:179579277;179579276;179579275 |
N2A | 7498 | 22717;22718;22719 | chr2:178714550;178714549;178714548 | chr2:179579277;179579276;179579275 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1302096327 | None | 0.004 | N | 0.497 | 0.127 | 0.592455534737 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
L/P | rs1302096327 | None | 0.004 | N | 0.497 | 0.127 | 0.592455534737 | gnomAD-4.0.0 | 7.56262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.12838E-06 | 0 | 3.33056E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3033 | likely_benign | 0.5249 | ambiguous | -2.081 | Highly Destabilizing | 0.469 | N | 0.581 | neutral | None | None | None | None | N |
L/C | 0.6032 | likely_pathogenic | 0.7788 | pathogenic | -1.307 | Destabilizing | 0.993 | D | 0.74 | deleterious | None | None | None | None | N |
L/D | 0.9241 | likely_pathogenic | 0.9727 | pathogenic | -1.454 | Destabilizing | 0.861 | D | 0.835 | deleterious | None | None | None | None | N |
L/E | 0.7753 | likely_pathogenic | 0.9038 | pathogenic | -1.33 | Destabilizing | 0.82 | D | 0.825 | deleterious | None | None | None | None | N |
L/F | 0.2811 | likely_benign | 0.4494 | ambiguous | -1.22 | Destabilizing | 0.79 | D | 0.635 | neutral | N | 0.497957919 | None | None | N |
L/G | 0.6708 | likely_pathogenic | 0.8521 | pathogenic | -2.542 | Highly Destabilizing | 0.861 | D | 0.817 | deleterious | None | None | None | None | N |
L/H | 0.6486 | likely_pathogenic | 0.8429 | pathogenic | -1.751 | Destabilizing | 0.978 | D | 0.805 | deleterious | N | 0.521849072 | None | None | N |
L/I | 0.092 | likely_benign | 0.1118 | benign | -0.813 | Destabilizing | 0.019 | N | 0.509 | neutral | N | 0.465014639 | None | None | N |
L/K | 0.7763 | likely_pathogenic | 0.8937 | pathogenic | -1.401 | Destabilizing | 0.154 | N | 0.778 | deleterious | None | None | None | None | N |
L/M | 0.1464 | likely_benign | 0.1851 | benign | -0.672 | Destabilizing | 0.6 | D | 0.628 | neutral | None | None | None | None | N |
L/N | 0.7153 | likely_pathogenic | 0.8593 | pathogenic | -1.411 | Destabilizing | 0.926 | D | 0.837 | deleterious | None | None | None | None | N |
L/P | 0.1048 | likely_benign | 0.2257 | benign | -1.209 | Destabilizing | 0.004 | N | 0.497 | neutral | N | 0.478218542 | None | None | N |
L/Q | 0.4993 | ambiguous | 0.7247 | pathogenic | -1.414 | Destabilizing | 0.839 | D | 0.794 | deleterious | None | None | None | None | N |
L/R | 0.6475 | likely_pathogenic | 0.8346 | pathogenic | -0.991 | Destabilizing | 0.79 | D | 0.786 | deleterious | N | 0.521342093 | None | None | N |
L/S | 0.5563 | ambiguous | 0.8063 | pathogenic | -2.189 | Highly Destabilizing | 0.861 | D | 0.777 | deleterious | None | None | None | None | N |
L/T | 0.3785 | ambiguous | 0.6045 | pathogenic | -1.924 | Destabilizing | 0.347 | N | 0.699 | prob.neutral | None | None | None | None | N |
L/V | 0.1051 | likely_benign | 0.1507 | benign | -1.209 | Destabilizing | 0.001 | N | 0.355 | neutral | N | 0.479511269 | None | None | N |
L/W | 0.6116 | likely_pathogenic | 0.8173 | pathogenic | -1.408 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
L/Y | 0.6888 | likely_pathogenic | 0.8557 | pathogenic | -1.152 | Destabilizing | 0.641 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.