Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8743 | 26452;26453;26454 | chr2:178714547;178714546;178714545 | chr2:179579274;179579273;179579272 |
N2AB | 8426 | 25501;25502;25503 | chr2:178714547;178714546;178714545 | chr2:179579274;179579273;179579272 |
N2A | 7499 | 22720;22721;22722 | chr2:178714547;178714546;178714545 | chr2:179579274;179579273;179579272 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs997483780 | None | 0.008 | N | 0.234 | 0.198 | 0.199424873507 | gnomAD-4.0.0 | 4.12439E-06 | None | None | None | None | I | None | 0 | 2.25317E-05 | None | 0 | 0 | None | 0 | 0 | 3.61209E-06 | 0 | 1.66495E-05 |
S/N | None | None | None | N | 0.071 | 0.147 | 0.166414681773 | gnomAD-4.0.0 | 1.60822E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89382E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0739 | likely_benign | 0.0779 | benign | -0.267 | Destabilizing | None | N | 0.255 | neutral | None | None | None | None | I |
S/C | 0.1239 | likely_benign | 0.1592 | benign | -0.374 | Destabilizing | 0.348 | N | 0.357 | neutral | N | 0.520183454 | None | None | I |
S/D | 0.1737 | likely_benign | 0.2257 | benign | 0.296 | Stabilizing | None | N | 0.079 | neutral | None | None | None | None | I |
S/E | 0.2463 | likely_benign | 0.2844 | benign | 0.206 | Stabilizing | None | N | 0.091 | neutral | None | None | None | None | I |
S/F | 0.144 | likely_benign | 0.188 | benign | -0.904 | Destabilizing | 0.412 | N | 0.404 | neutral | None | None | None | None | I |
S/G | 0.0679 | likely_benign | 0.0812 | benign | -0.364 | Destabilizing | 0.008 | N | 0.234 | neutral | N | 0.504027755 | None | None | I |
S/H | 0.1844 | likely_benign | 0.2192 | benign | -0.779 | Destabilizing | 0.001 | N | 0.215 | neutral | None | None | None | None | I |
S/I | 0.1157 | likely_benign | 0.1503 | benign | -0.147 | Destabilizing | 0.115 | N | 0.431 | neutral | N | 0.507902096 | None | None | I |
S/K | 0.2946 | likely_benign | 0.3494 | ambiguous | -0.376 | Destabilizing | 0.02 | N | 0.195 | neutral | None | None | None | None | I |
S/L | 0.0828 | likely_benign | 0.0939 | benign | -0.147 | Destabilizing | 0.047 | N | 0.404 | neutral | None | None | None | None | I |
S/M | 0.1578 | likely_benign | 0.1751 | benign | -0.113 | Destabilizing | 0.412 | N | 0.352 | neutral | None | None | None | None | I |
S/N | 0.0751 | likely_benign | 0.0927 | benign | -0.169 | Destabilizing | None | N | 0.071 | neutral | N | 0.491910981 | None | None | I |
S/P | 0.1134 | likely_benign | 0.1552 | benign | -0.159 | Destabilizing | 0.051 | N | 0.396 | neutral | None | None | None | None | I |
S/Q | 0.2529 | likely_benign | 0.3022 | benign | -0.365 | Destabilizing | 0.09 | N | 0.251 | neutral | None | None | None | None | I |
S/R | 0.2359 | likely_benign | 0.3006 | benign | -0.191 | Destabilizing | 0.069 | N | 0.395 | neutral | N | 0.480051779 | None | None | I |
S/T | 0.0678 | likely_benign | 0.0714 | benign | -0.264 | Destabilizing | None | N | 0.071 | neutral | N | 0.484909542 | None | None | I |
S/V | 0.1284 | likely_benign | 0.1557 | benign | -0.159 | Destabilizing | 0.018 | N | 0.391 | neutral | None | None | None | None | I |
S/W | 0.2136 | likely_benign | 0.275 | benign | -0.948 | Destabilizing | 0.89 | D | 0.413 | neutral | None | None | None | None | I |
S/Y | 0.1336 | likely_benign | 0.1644 | benign | -0.636 | Destabilizing | 0.257 | N | 0.42 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.