Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8750 | 26473;26474;26475 | chr2:178714526;178714525;178714524 | chr2:179579253;179579252;179579251 |
N2AB | 8433 | 25522;25523;25524 | chr2:178714526;178714525;178714524 | chr2:179579253;179579252;179579251 |
N2A | 7506 | 22741;22742;22743 | chr2:178714526;178714525;178714524 | chr2:179579253;179579252;179579251 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/C | rs757423560 | -0.635 | 0.983 | D | 0.781 | 0.622 | 0.850572185047 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
G/C | rs757423560 | -0.635 | 0.983 | D | 0.781 | 0.622 | 0.850572185047 | gnomAD-4.0.0 | 6.84531E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16077E-05 | 0 |
G/S | None | None | 0.139 | D | 0.718 | 0.514 | 0.403609169532 | gnomAD-4.0.0 | 6.84531E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65761E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2425 | likely_benign | 0.3566 | ambiguous | -0.457 | Destabilizing | 0.01 | N | 0.355 | neutral | D | 0.651453561 | None | None | I |
G/C | 0.4003 | ambiguous | 0.5303 | ambiguous | -0.897 | Destabilizing | 0.983 | D | 0.781 | deleterious | D | 0.652058973 | None | None | I |
G/D | 0.1499 | likely_benign | 0.2091 | benign | -0.839 | Destabilizing | 0.005 | N | 0.471 | neutral | D | 0.604567019 | None | None | I |
G/E | 0.1924 | likely_benign | 0.2916 | benign | -0.985 | Destabilizing | 0.81 | D | 0.779 | deleterious | None | None | None | None | I |
G/F | 0.6707 | likely_pathogenic | 0.7944 | pathogenic | -1.019 | Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | I |
G/H | 0.4202 | ambiguous | 0.5561 | ambiguous | -0.757 | Destabilizing | 0.985 | D | 0.795 | deleterious | None | None | None | None | I |
G/I | 0.5957 | likely_pathogenic | 0.7778 | pathogenic | -0.473 | Destabilizing | 0.945 | D | 0.793 | deleterious | None | None | None | None | I |
G/K | 0.4064 | ambiguous | 0.5846 | pathogenic | -1.133 | Destabilizing | 0.895 | D | 0.781 | deleterious | None | None | None | None | I |
G/L | 0.5191 | ambiguous | 0.6714 | pathogenic | -0.473 | Destabilizing | 0.895 | D | 0.763 | deleterious | None | None | None | None | I |
G/M | 0.6152 | likely_pathogenic | 0.7601 | pathogenic | -0.474 | Destabilizing | 0.995 | D | 0.782 | deleterious | None | None | None | None | I |
G/N | 0.2263 | likely_benign | 0.3002 | benign | -0.743 | Destabilizing | 0.81 | D | 0.781 | deleterious | None | None | None | None | I |
G/P | 0.8873 | likely_pathogenic | 0.9399 | pathogenic | -0.432 | Destabilizing | 0.866 | D | 0.803 | deleterious | None | None | None | None | I |
G/Q | 0.3007 | likely_benign | 0.4335 | ambiguous | -1.03 | Destabilizing | 0.895 | D | 0.807 | deleterious | None | None | None | None | I |
G/R | 0.3021 | likely_benign | 0.4466 | ambiguous | -0.636 | Destabilizing | 0.866 | D | 0.809 | deleterious | D | 0.635403839 | None | None | I |
G/S | 0.1283 | likely_benign | 0.1742 | benign | -0.889 | Destabilizing | 0.139 | N | 0.718 | prob.delet. | D | 0.605979649 | None | None | I |
G/T | 0.2909 | likely_benign | 0.4229 | ambiguous | -0.97 | Destabilizing | 0.895 | D | 0.788 | deleterious | None | None | None | None | I |
G/V | 0.4747 | ambiguous | 0.6664 | pathogenic | -0.432 | Destabilizing | 0.866 | D | 0.764 | deleterious | D | 0.651857169 | None | None | I |
G/W | 0.446 | ambiguous | 0.5694 | pathogenic | -1.21 | Destabilizing | 0.995 | D | 0.776 | deleterious | None | None | None | None | I |
G/Y | 0.5207 | ambiguous | 0.6595 | pathogenic | -0.874 | Destabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.