Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8752 | 26479;26480;26481 | chr2:178714520;178714519;178714518 | chr2:179579247;179579246;179579245 |
N2AB | 8435 | 25528;25529;25530 | chr2:178714520;178714519;178714518 | chr2:179579247;179579246;179579245 |
N2A | 7508 | 22747;22748;22749 | chr2:178714520;178714519;178714518 | chr2:179579247;179579246;179579245 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.001 | N | 0.293 | 0.11 | 0.0986583533028 | gnomAD-4.0.0 | 1.59258E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85984E-06 | 0 | 0 |
E/K | None | None | 0.003 | N | 0.317 | 0.132 | 0.134241683229 | gnomAD-4.0.0 | 6.84474E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99643E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0819 | likely_benign | 0.0834 | benign | -0.743 | Destabilizing | 0.001 | N | 0.293 | neutral | N | 0.396949527 | None | None | I |
E/C | 0.6947 | likely_pathogenic | 0.7115 | pathogenic | -0.353 | Destabilizing | 0.492 | N | 0.257 | neutral | None | None | None | None | I |
E/D | 0.0835 | likely_benign | 0.0859 | benign | -0.722 | Destabilizing | None | N | 0.287 | neutral | N | 0.439025436 | None | None | I |
E/F | 0.5271 | ambiguous | 0.5509 | ambiguous | -0.342 | Destabilizing | 0.135 | N | 0.279 | neutral | None | None | None | None | I |
E/G | 0.0942 | likely_benign | 0.1015 | benign | -1.03 | Destabilizing | None | N | 0.169 | neutral | N | 0.496959018 | None | None | I |
E/H | 0.2822 | likely_benign | 0.2901 | benign | -0.374 | Destabilizing | 0.052 | N | 0.299 | neutral | None | None | None | None | I |
E/I | 0.2153 | likely_benign | 0.2306 | benign | 0.014 | Stabilizing | 0.035 | N | 0.343 | neutral | None | None | None | None | I |
E/K | 0.0932 | likely_benign | 0.0987 | benign | -0.197 | Destabilizing | 0.003 | N | 0.317 | neutral | N | 0.458824705 | None | None | I |
E/L | 0.2293 | likely_benign | 0.2434 | benign | 0.014 | Stabilizing | 0.005 | N | 0.376 | neutral | None | None | None | None | I |
E/M | 0.2747 | likely_benign | 0.2912 | benign | 0.26 | Stabilizing | 0.013 | N | 0.259 | neutral | None | None | None | None | I |
E/N | 0.1297 | likely_benign | 0.1357 | benign | -0.624 | Destabilizing | 0.005 | N | 0.229 | neutral | None | None | None | None | I |
E/P | 0.1905 | likely_benign | 0.1784 | benign | -0.217 | Destabilizing | None | N | 0.188 | neutral | None | None | None | None | I |
E/Q | 0.1049 | likely_benign | 0.1091 | benign | -0.553 | Destabilizing | None | N | 0.188 | neutral | N | 0.427099075 | None | None | I |
E/R | 0.1563 | likely_benign | 0.165 | benign | 0.091 | Stabilizing | None | N | 0.179 | neutral | None | None | None | None | I |
E/S | 0.1145 | likely_benign | 0.1178 | benign | -0.854 | Destabilizing | None | N | 0.151 | neutral | None | None | None | None | I |
E/T | 0.1119 | likely_benign | 0.1175 | benign | -0.619 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | I |
E/V | 0.1335 | likely_benign | 0.1403 | benign | -0.217 | Destabilizing | 0.003 | N | 0.356 | neutral | N | 0.459518138 | None | None | I |
E/W | 0.6931 | likely_pathogenic | 0.7143 | pathogenic | -0.087 | Destabilizing | 0.828 | D | 0.293 | neutral | None | None | None | None | I |
E/Y | 0.3765 | ambiguous | 0.3934 | ambiguous | -0.087 | Destabilizing | 0.295 | N | 0.272 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.