Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8753 | 26482;26483;26484 | chr2:178714517;178714516;178714515 | chr2:179579244;179579243;179579242 |
N2AB | 8436 | 25531;25532;25533 | chr2:178714517;178714516;178714515 | chr2:179579244;179579243;179579242 |
N2A | 7509 | 22750;22751;22752 | chr2:178714517;178714516;178714515 | chr2:179579244;179579243;179579242 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs867579263 | None | 0.285 | N | 0.727 | 0.307 | 0.711079051923 | gnomAD-4.0.0 | 5.4756E-06 | None | None | None | None | I | None | 8.97022E-05 | 0 | None | 0 | 0 | None | 0 | 1.73611E-04 | 2.6989E-06 | 0 | 1.65733E-05 |
V/I | rs373070956 | -0.328 | None | N | 0.335 | 0.13 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs373070956 | -0.328 | None | N | 0.335 | 0.13 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs373070956 | -0.328 | None | N | 0.335 | 0.13 | None | gnomAD-4.0.0 | 6.57367E-06 | None | None | None | None | I | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1004 | likely_benign | 0.1145 | benign | -1.834 | Destabilizing | None | N | 0.204 | neutral | N | 0.465580106 | None | None | I |
V/C | 0.6204 | likely_pathogenic | 0.7058 | pathogenic | -1.476 | Destabilizing | 0.895 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/D | 0.4639 | ambiguous | 0.5637 | ambiguous | -1.633 | Destabilizing | 0.984 | D | 0.779 | deleterious | N | 0.518926238 | None | None | I |
V/E | 0.4158 | ambiguous | 0.4895 | ambiguous | -1.483 | Destabilizing | 0.932 | D | 0.752 | deleterious | None | None | None | None | I |
V/F | 0.1365 | likely_benign | 0.1839 | benign | -1.068 | Destabilizing | 0.799 | D | 0.729 | prob.delet. | N | 0.461446694 | None | None | I |
V/G | 0.1443 | likely_benign | 0.1699 | benign | -2.316 | Highly Destabilizing | 0.285 | N | 0.727 | prob.delet. | N | 0.488958698 | None | None | I |
V/H | 0.6626 | likely_pathogenic | 0.7473 | pathogenic | -1.745 | Destabilizing | 0.972 | D | 0.762 | deleterious | None | None | None | None | I |
V/I | 0.0723 | likely_benign | 0.0767 | benign | -0.537 | Destabilizing | None | N | 0.335 | neutral | N | 0.512219259 | None | None | I |
V/K | 0.4862 | ambiguous | 0.5772 | pathogenic | -1.508 | Destabilizing | 0.967 | D | 0.756 | deleterious | None | None | None | None | I |
V/L | 0.1588 | likely_benign | 0.1913 | benign | -0.537 | Destabilizing | 0.019 | N | 0.475 | neutral | N | 0.50194355 | None | None | I |
V/M | 0.114 | likely_benign | 0.1315 | benign | -0.604 | Destabilizing | 0.791 | D | 0.565 | neutral | None | None | None | None | I |
V/N | 0.3314 | likely_benign | 0.4179 | ambiguous | -1.597 | Destabilizing | 0.899 | D | 0.78 | deleterious | None | None | None | None | I |
V/P | 0.7399 | likely_pathogenic | 0.7892 | pathogenic | -0.937 | Destabilizing | 0.815 | D | 0.76 | deleterious | None | None | None | None | I |
V/Q | 0.4395 | ambiguous | 0.5205 | ambiguous | -1.542 | Destabilizing | 0.977 | D | 0.749 | deleterious | None | None | None | None | I |
V/R | 0.454 | ambiguous | 0.5463 | ambiguous | -1.202 | Destabilizing | 0.984 | D | 0.783 | deleterious | None | None | None | None | I |
V/S | 0.1863 | likely_benign | 0.2313 | benign | -2.304 | Highly Destabilizing | 0.137 | N | 0.707 | prob.neutral | None | None | None | None | I |
V/T | 0.1443 | likely_benign | 0.1701 | benign | -2.002 | Highly Destabilizing | 0.06 | N | 0.571 | neutral | None | None | None | None | I |
V/W | 0.7505 | likely_pathogenic | 0.844 | pathogenic | -1.358 | Destabilizing | 0.992 | D | 0.736 | prob.delet. | None | None | None | None | I |
V/Y | 0.4927 | ambiguous | 0.594 | pathogenic | -1.025 | Destabilizing | 0.806 | D | 0.715 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.