Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8754 | 26485;26486;26487 | chr2:178714514;178714513;178714512 | chr2:179579241;179579240;179579239 |
N2AB | 8437 | 25534;25535;25536 | chr2:178714514;178714513;178714512 | chr2:179579241;179579240;179579239 |
N2A | 7510 | 22753;22754;22755 | chr2:178714514;178714513;178714512 | chr2:179579241;179579240;179579239 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs764746720 | -0.231 | 0.239 | N | 0.401 | 0.122 | 0.0551355673512 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
Q/H | rs764746720 | -0.231 | 0.239 | N | 0.401 | 0.122 | 0.0551355673512 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07297E-04 | 0 |
Q/H | rs764746720 | -0.231 | 0.239 | N | 0.401 | 0.122 | 0.0551355673512 | gnomAD-4.0.0 | 5.57899E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 9.88859E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1593 | likely_benign | 0.1711 | benign | -0.511 | Destabilizing | 0.006 | N | 0.342 | neutral | None | None | None | None | N |
Q/C | 0.4104 | ambiguous | 0.4977 | ambiguous | -0.029 | Destabilizing | 0.488 | N | 0.465 | neutral | None | None | None | None | N |
Q/D | 0.2809 | likely_benign | 0.3211 | benign | -0.346 | Destabilizing | 0.004 | N | 0.351 | neutral | None | None | None | None | N |
Q/E | 0.071 | likely_benign | 0.0703 | benign | -0.269 | Destabilizing | None | N | 0.226 | neutral | N | 0.393330431 | None | None | N |
Q/F | 0.4255 | ambiguous | 0.455 | ambiguous | -0.205 | Destabilizing | 0.142 | N | 0.536 | neutral | None | None | None | None | N |
Q/G | 0.2084 | likely_benign | 0.2485 | benign | -0.848 | Destabilizing | 0.026 | N | 0.394 | neutral | None | None | None | None | N |
Q/H | 0.1363 | likely_benign | 0.1517 | benign | -0.632 | Destabilizing | 0.239 | N | 0.401 | neutral | N | 0.455245682 | None | None | N |
Q/I | 0.2178 | likely_benign | 0.2197 | benign | 0.335 | Stabilizing | 0.012 | N | 0.48 | neutral | None | None | None | None | N |
Q/K | 0.0836 | likely_benign | 0.0859 | benign | -0.335 | Destabilizing | None | N | 0.229 | neutral | N | 0.405990297 | None | None | N |
Q/L | 0.0901 | likely_benign | 0.0958 | benign | 0.335 | Stabilizing | 0.004 | N | 0.389 | neutral | N | 0.473060651 | None | None | N |
Q/M | 0.2573 | likely_benign | 0.2562 | benign | 0.586 | Stabilizing | 0.293 | N | 0.402 | neutral | None | None | None | None | N |
Q/N | 0.2261 | likely_benign | 0.2365 | benign | -0.811 | Destabilizing | 0.018 | N | 0.413 | neutral | None | None | None | None | N |
Q/P | 0.2146 | likely_benign | 0.2887 | benign | 0.085 | Stabilizing | 0.027 | N | 0.498 | neutral | N | 0.454184404 | None | None | N |
Q/R | 0.0843 | likely_benign | 0.0927 | benign | -0.24 | Destabilizing | None | N | 0.261 | neutral | N | 0.446932843 | None | None | N |
Q/S | 0.1756 | likely_benign | 0.176 | benign | -0.877 | Destabilizing | 0.002 | N | 0.222 | neutral | None | None | None | None | N |
Q/T | 0.1314 | likely_benign | 0.129 | benign | -0.61 | Destabilizing | None | N | 0.27 | neutral | None | None | None | None | N |
Q/V | 0.1544 | likely_benign | 0.1542 | benign | 0.085 | Stabilizing | None | N | 0.351 | neutral | None | None | None | None | N |
Q/W | 0.3112 | likely_benign | 0.3943 | ambiguous | -0.096 | Destabilizing | 0.947 | D | 0.469 | neutral | None | None | None | None | N |
Q/Y | 0.2671 | likely_benign | 0.2991 | benign | 0.109 | Stabilizing | 0.335 | N | 0.492 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.