Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8756 | 26491;26492;26493 | chr2:178714508;178714507;178714506 | chr2:179579235;179579234;179579233 |
N2AB | 8439 | 25540;25541;25542 | chr2:178714508;178714507;178714506 | chr2:179579235;179579234;179579233 |
N2A | 7512 | 22759;22760;22761 | chr2:178714508;178714507;178714506 | chr2:179579235;179579234;179579233 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs776025006 | -0.967 | 0.993 | N | 0.529 | 0.304 | 0.346315397577 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
Q/H | rs776025006 | -0.967 | 0.993 | N | 0.529 | 0.304 | 0.346315397577 | gnomAD-4.0.0 | 1.5923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43377E-05 | 0 |
Q/R | rs761090454 | -0.06 | 0.901 | N | 0.506 | 0.199 | 0.225215365344 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2358 | likely_benign | 0.2873 | benign | -0.686 | Destabilizing | 0.904 | D | 0.472 | neutral | None | None | None | None | N |
Q/C | 0.5507 | ambiguous | 0.6816 | pathogenic | -0.089 | Destabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
Q/D | 0.3717 | ambiguous | 0.4745 | ambiguous | -0.282 | Destabilizing | 0.977 | D | 0.485 | neutral | None | None | None | None | N |
Q/E | 0.0757 | likely_benign | 0.0838 | benign | -0.193 | Destabilizing | 0.948 | D | 0.469 | neutral | N | 0.443205544 | None | None | N |
Q/F | 0.5874 | likely_pathogenic | 0.696 | pathogenic | -0.373 | Destabilizing | 0.978 | D | 0.623 | neutral | None | None | None | None | N |
Q/G | 0.269 | likely_benign | 0.3495 | ambiguous | -1.03 | Destabilizing | 0.979 | D | 0.556 | neutral | None | None | None | None | N |
Q/H | 0.1926 | likely_benign | 0.2456 | benign | -0.783 | Destabilizing | 0.993 | D | 0.529 | neutral | N | 0.491506135 | None | None | N |
Q/I | 0.3203 | likely_benign | 0.3848 | ambiguous | 0.185 | Stabilizing | 0.819 | D | 0.552 | neutral | None | None | None | None | N |
Q/K | 0.0917 | likely_benign | 0.107 | benign | -0.232 | Destabilizing | 0.933 | D | 0.481 | neutral | D | 0.522359761 | None | None | N |
Q/L | 0.1351 | likely_benign | 0.1722 | benign | 0.185 | Stabilizing | 0.021 | N | 0.393 | neutral | N | 0.516377938 | None | None | N |
Q/M | 0.3314 | likely_benign | 0.3905 | ambiguous | 0.569 | Stabilizing | 0.45 | N | 0.343 | neutral | None | None | None | None | N |
Q/N | 0.3057 | likely_benign | 0.3698 | ambiguous | -0.765 | Destabilizing | 0.993 | D | 0.525 | neutral | None | None | None | None | N |
Q/P | 0.351 | ambiguous | 0.5305 | ambiguous | -0.074 | Destabilizing | 0.991 | D | 0.573 | neutral | N | 0.488948467 | None | None | N |
Q/R | 0.0928 | likely_benign | 0.1123 | benign | -0.15 | Destabilizing | 0.901 | D | 0.506 | neutral | N | 0.518012734 | None | None | N |
Q/S | 0.2582 | likely_benign | 0.3015 | benign | -0.915 | Destabilizing | 0.979 | D | 0.453 | neutral | None | None | None | None | N |
Q/T | 0.1796 | likely_benign | 0.2156 | benign | -0.626 | Destabilizing | 0.641 | D | 0.483 | neutral | None | None | None | None | N |
Q/V | 0.2209 | likely_benign | 0.2615 | benign | -0.074 | Destabilizing | 0.577 | D | 0.525 | neutral | None | None | None | None | N |
Q/W | 0.4039 | ambiguous | 0.5641 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
Q/Y | 0.3968 | ambiguous | 0.5104 | ambiguous | 0.014 | Stabilizing | 0.996 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.