Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8760 | 26503;26504;26505 | chr2:178714496;178714495;178714494 | chr2:179579223;179579222;179579221 |
N2AB | 8443 | 25552;25553;25554 | chr2:178714496;178714495;178714494 | chr2:179579223;179579222;179579221 |
N2A | 7516 | 22771;22772;22773 | chr2:178714496;178714495;178714494 | chr2:179579223;179579222;179579221 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2077161238 | None | 0.001 | N | 0.108 | 0.182 | 0.229924730088 | gnomAD-4.0.0 | 1.77937E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.33896E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1317 | likely_benign | 0.1691 | benign | -0.495 | Destabilizing | 0.025 | N | 0.32 | neutral | N | 0.494637229 | None | None | N |
E/C | 0.8287 | likely_pathogenic | 0.8926 | pathogenic | -0.162 | Destabilizing | 0.93 | D | 0.474 | neutral | None | None | None | None | N |
E/D | 0.1837 | likely_benign | 0.2211 | benign | -0.523 | Destabilizing | 0.006 | N | 0.283 | neutral | D | 0.536542566 | None | None | N |
E/F | 0.6987 | likely_pathogenic | 0.7755 | pathogenic | -0.195 | Destabilizing | 0.867 | D | 0.433 | neutral | None | None | None | None | N |
E/G | 0.1979 | likely_benign | 0.2917 | benign | -0.736 | Destabilizing | 0.289 | N | 0.35 | neutral | N | 0.497813238 | None | None | N |
E/H | 0.3729 | ambiguous | 0.4511 | ambiguous | -0.024 | Destabilizing | 0.43 | N | 0.352 | neutral | None | None | None | None | N |
E/I | 0.3133 | likely_benign | 0.3831 | ambiguous | 0.123 | Stabilizing | 0.5 | N | 0.46 | neutral | None | None | None | None | N |
E/K | 0.1134 | likely_benign | 0.1563 | benign | 0.213 | Stabilizing | 0.001 | N | 0.108 | neutral | N | 0.461524733 | None | None | N |
E/L | 0.3499 | ambiguous | 0.4386 | ambiguous | 0.123 | Stabilizing | 0.123 | N | 0.416 | neutral | None | None | None | None | N |
E/M | 0.4032 | ambiguous | 0.4962 | ambiguous | 0.235 | Stabilizing | 0.403 | N | 0.412 | neutral | None | None | None | None | N |
E/N | 0.3201 | likely_benign | 0.3977 | ambiguous | -0.245 | Destabilizing | 0.061 | N | 0.293 | neutral | None | None | None | None | N |
E/P | 0.9246 | likely_pathogenic | 0.9601 | pathogenic | -0.062 | Destabilizing | 0.129 | N | 0.357 | neutral | None | None | None | None | N |
E/Q | 0.1088 | likely_benign | 0.1259 | benign | -0.195 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.486252669 | None | None | N |
E/R | 0.1909 | likely_benign | 0.2557 | benign | 0.48 | Stabilizing | 0.131 | N | 0.261 | neutral | None | None | None | None | N |
E/S | 0.1788 | likely_benign | 0.2177 | benign | -0.412 | Destabilizing | 0.006 | N | 0.151 | neutral | None | None | None | None | N |
E/T | 0.1791 | likely_benign | 0.2184 | benign | -0.212 | Destabilizing | 0.101 | N | 0.309 | neutral | None | None | None | None | N |
E/V | 0.1902 | likely_benign | 0.2345 | benign | -0.062 | Destabilizing | 0.07 | N | 0.371 | neutral | N | 0.49055831 | None | None | N |
E/W | 0.8407 | likely_pathogenic | 0.8983 | pathogenic | 0.025 | Stabilizing | 0.985 | D | 0.557 | neutral | None | None | None | None | N |
E/Y | 0.5813 | likely_pathogenic | 0.6776 | pathogenic | 0.069 | Stabilizing | 0.851 | D | 0.424 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.