Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8761 | 26506;26507;26508 | chr2:178714493;178714492;178714491 | chr2:179579220;179579219;179579218 |
N2AB | 8444 | 25555;25556;25557 | chr2:178714493;178714492;178714491 | chr2:179579220;179579219;179579218 |
N2A | 7517 | 22774;22775;22776 | chr2:178714493;178714492;178714491 | chr2:179579220;179579219;179579218 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs369385294 | -0.776 | 1.0 | D | 0.842 | 0.667 | None | gnomAD-2.1.1 | 5.37E-05 | None | None | None | None | N | None | 4.14E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.09714E-04 | 0 |
G/S | rs369385294 | -0.776 | 1.0 | D | 0.842 | 0.667 | None | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 7.35E-05 | 0 | 0 |
G/S | rs369385294 | -0.776 | 1.0 | D | 0.842 | 0.667 | None | gnomAD-4.0.0 | 1.41941E-04 | None | None | None | None | N | None | 8.01325E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.86499E-04 | 0 | 4.80446E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3277 | likely_benign | 0.5219 | ambiguous | -0.425 | Destabilizing | 0.999 | D | 0.773 | deleterious | D | 0.57484102 | None | None | N |
G/C | 0.7658 | likely_pathogenic | 0.927 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | D | 0.62213117 | None | None | N |
G/D | 0.7425 | likely_pathogenic | 0.9116 | pathogenic | -1.165 | Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.601186349 | None | None | N |
G/E | 0.8249 | likely_pathogenic | 0.953 | pathogenic | -1.307 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
G/F | 0.9467 | likely_pathogenic | 0.9831 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
G/H | 0.949 | likely_pathogenic | 0.9869 | pathogenic | -0.923 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
G/I | 0.8455 | likely_pathogenic | 0.9575 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
G/K | 0.9505 | likely_pathogenic | 0.988 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
G/L | 0.8893 | likely_pathogenic | 0.9664 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
G/M | 0.9069 | likely_pathogenic | 0.975 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
G/N | 0.8335 | likely_pathogenic | 0.9467 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
G/P | 0.9819 | likely_pathogenic | 0.9945 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
G/Q | 0.9297 | likely_pathogenic | 0.9818 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
G/R | 0.9208 | likely_pathogenic | 0.9788 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.814 | deleterious | D | 0.647265673 | None | None | N |
G/S | 0.3171 | likely_benign | 0.5774 | pathogenic | -0.796 | Destabilizing | 1.0 | D | 0.842 | deleterious | D | 0.588851262 | None | None | N |
G/T | 0.6427 | likely_pathogenic | 0.8532 | pathogenic | -0.886 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
G/V | 0.7173 | likely_pathogenic | 0.9023 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.647265673 | None | None | N |
G/W | 0.8997 | likely_pathogenic | 0.9687 | pathogenic | -1.288 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
G/Y | 0.9043 | likely_pathogenic | 0.9731 | pathogenic | -0.943 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.