Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8764 | 26515;26516;26517 | chr2:178714484;178714483;178714482 | chr2:179579211;179579210;179579209 |
N2AB | 8447 | 25564;25565;25566 | chr2:178714484;178714483;178714482 | chr2:179579211;179579210;179579209 |
N2A | 7520 | 22783;22784;22785 | chr2:178714484;178714483;178714482 | chr2:179579211;179579210;179579209 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.694 | 0.483 | 0.512825096792 | gnomAD-4.0.0 | 2.7373E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59826E-06 | 0 | 0 |
P/T | None | None | 1.0 | N | 0.686 | 0.469 | 0.54173910141 | gnomAD-4.0.0 | 6.84326E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1899 | likely_benign | 0.2195 | benign | -0.418 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.49736503 | None | None | I |
P/C | 0.8191 | likely_pathogenic | 0.858 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
P/D | 0.5446 | ambiguous | 0.6067 | pathogenic | -0.447 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
P/E | 0.4673 | ambiguous | 0.5439 | ambiguous | -0.577 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
P/F | 0.7342 | likely_pathogenic | 0.7956 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | I |
P/G | 0.5115 | ambiguous | 0.5652 | pathogenic | -0.521 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/H | 0.3981 | ambiguous | 0.4653 | ambiguous | -0.147 | Destabilizing | 1.0 | D | 0.642 | neutral | D | 0.527612512 | None | None | I |
P/I | 0.579 | likely_pathogenic | 0.6441 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
P/K | 0.5033 | ambiguous | 0.5581 | ambiguous | -0.428 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
P/L | 0.2752 | likely_benign | 0.3258 | benign | -0.302 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.510722798 | None | None | I |
P/M | 0.5207 | ambiguous | 0.5868 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
P/N | 0.4439 | ambiguous | 0.5014 | ambiguous | -0.129 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/Q | 0.3501 | ambiguous | 0.4086 | ambiguous | -0.406 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
P/R | 0.3854 | ambiguous | 0.4448 | ambiguous | 0.111 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | N | 0.500353998 | None | None | I |
P/S | 0.2855 | likely_benign | 0.3423 | ambiguous | -0.43 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.499593529 | None | None | I |
P/T | 0.2244 | likely_benign | 0.2785 | benign | -0.467 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | N | 0.495617057 | None | None | I |
P/V | 0.4355 | ambiguous | 0.4917 | ambiguous | -0.307 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
P/W | 0.861 | likely_pathogenic | 0.9004 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
P/Y | 0.6723 | likely_pathogenic | 0.732 | pathogenic | -0.534 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.