Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8775 | 26548;26549;26550 | chr2:178714451;178714450;178714449 | chr2:179579178;179579177;179579176 |
N2AB | 8458 | 25597;25598;25599 | chr2:178714451;178714450;178714449 | chr2:179579178;179579177;179579176 |
N2A | 7531 | 22816;22817;22818 | chr2:178714451;178714450;178714449 | chr2:179579178;179579177;179579176 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs758590305 | -0.516 | 0.884 | N | 0.521 | 0.377 | 0.413113201963 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
E/A | rs758590305 | -0.516 | 0.884 | N | 0.521 | 0.377 | 0.413113201963 | gnomAD-4.0.0 | 1.59164E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85884E-06 | 0 | 0 |
E/D | None | None | 0.288 | N | 0.484 | 0.166 | 0.282575091529 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1832 | likely_benign | 0.2354 | benign | -0.635 | Destabilizing | 0.884 | D | 0.521 | neutral | N | 0.494215159 | None | None | N |
E/C | 0.8462 | likely_pathogenic | 0.8892 | pathogenic | -0.258 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/D | 0.1024 | likely_benign | 0.1001 | benign | -0.594 | Destabilizing | 0.288 | N | 0.484 | neutral | N | 0.495229117 | None | None | N |
E/F | 0.6631 | likely_pathogenic | 0.7522 | pathogenic | -0.213 | Destabilizing | 0.985 | D | 0.673 | neutral | None | None | None | None | N |
E/G | 0.191 | likely_benign | 0.2574 | benign | -0.905 | Destabilizing | 0.962 | D | 0.519 | neutral | N | 0.517056355 | None | None | N |
E/H | 0.4499 | ambiguous | 0.5186 | ambiguous | -0.113 | Destabilizing | 0.02 | N | 0.203 | neutral | None | None | None | None | N |
E/I | 0.2976 | likely_benign | 0.3753 | ambiguous | 0.074 | Stabilizing | 0.989 | D | 0.67 | neutral | None | None | None | None | N |
E/K | 0.16 | likely_benign | 0.2233 | benign | 0.065 | Stabilizing | 0.874 | D | 0.512 | neutral | D | 0.530517884 | None | None | N |
E/L | 0.3794 | ambiguous | 0.4723 | ambiguous | 0.074 | Stabilizing | 0.968 | D | 0.565 | neutral | None | None | None | None | N |
E/M | 0.3913 | ambiguous | 0.4879 | ambiguous | 0.239 | Stabilizing | 0.984 | D | 0.657 | neutral | None | None | None | None | N |
E/N | 0.1985 | likely_benign | 0.231 | benign | -0.472 | Destabilizing | 0.667 | D | 0.489 | neutral | None | None | None | None | N |
E/P | 0.714 | likely_pathogenic | 0.754 | pathogenic | -0.141 | Destabilizing | 0.933 | D | 0.588 | neutral | None | None | None | None | N |
E/Q | 0.1493 | likely_benign | 0.1897 | benign | -0.384 | Destabilizing | 0.91 | D | 0.473 | neutral | N | 0.482805947 | None | None | N |
E/R | 0.2776 | likely_benign | 0.3612 | ambiguous | 0.348 | Stabilizing | 0.902 | D | 0.472 | neutral | None | None | None | None | N |
E/S | 0.2161 | likely_benign | 0.2664 | benign | -0.641 | Destabilizing | 0.91 | D | 0.485 | neutral | None | None | None | None | N |
E/T | 0.2352 | likely_benign | 0.3007 | benign | -0.411 | Destabilizing | 0.98 | D | 0.519 | neutral | None | None | None | None | N |
E/V | 0.1917 | likely_benign | 0.2413 | benign | -0.141 | Destabilizing | 0.98 | D | 0.55 | neutral | N | 0.490874251 | None | None | N |
E/W | 0.8405 | likely_pathogenic | 0.8929 | pathogenic | 0.052 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/Y | 0.5309 | ambiguous | 0.615 | pathogenic | 0.054 | Stabilizing | 0.989 | D | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.