Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8781 | 26566;26567;26568 | chr2:178714433;178714432;178714431 | chr2:179579160;179579159;179579158 |
N2AB | 8464 | 25615;25616;25617 | chr2:178714433;178714432;178714431 | chr2:179579160;179579159;179579158 |
N2A | 7537 | 22834;22835;22836 | chr2:178714433;178714432;178714431 | chr2:179579160;179579159;179579158 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs2077152071 | None | 0.328 | N | 0.369 | 0.238 | 0.250039746154 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
D/A | rs2077152071 | None | 0.328 | N | 0.369 | 0.238 | 0.250039746154 | gnomAD-4.0.0 | 6.57168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
D/N | None | None | 0.604 | N | 0.343 | 0.328 | 0.143124449307 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1272 | likely_benign | 0.1398 | benign | 0.09 | Stabilizing | 0.328 | N | 0.369 | neutral | N | 0.454793515 | None | None | N |
D/C | 0.5657 | likely_pathogenic | 0.6125 | pathogenic | 0.01 | Stabilizing | 0.968 | D | 0.571 | neutral | None | None | None | None | N |
D/E | 0.0963 | likely_benign | 0.0973 | benign | -0.373 | Destabilizing | None | N | 0.243 | neutral | N | 0.43198482 | None | None | N |
D/F | 0.5321 | ambiguous | 0.5953 | pathogenic | -0.135 | Destabilizing | 0.971 | D | 0.522 | neutral | None | None | None | None | N |
D/G | 0.1066 | likely_benign | 0.1163 | benign | 0.02 | Stabilizing | 0.413 | N | 0.321 | neutral | N | 0.494590717 | None | None | N |
D/H | 0.21 | likely_benign | 0.231 | benign | 0.396 | Stabilizing | 0.972 | D | 0.371 | neutral | N | 0.475811059 | None | None | N |
D/I | 0.3228 | likely_benign | 0.3792 | ambiguous | 0.2 | Stabilizing | 0.248 | N | 0.414 | neutral | None | None | None | None | N |
D/K | 0.1821 | likely_benign | 0.1924 | benign | 0.477 | Stabilizing | 0.89 | D | 0.333 | neutral | None | None | None | None | N |
D/L | 0.3142 | likely_benign | 0.3523 | ambiguous | 0.2 | Stabilizing | 0.699 | D | 0.433 | neutral | None | None | None | None | N |
D/M | 0.5127 | ambiguous | 0.5674 | pathogenic | 0.09 | Stabilizing | 0.979 | D | 0.517 | neutral | None | None | None | None | N |
D/N | 0.083 | likely_benign | 0.0927 | benign | 0.366 | Stabilizing | 0.604 | D | 0.343 | neutral | N | 0.46614982 | None | None | N |
D/P | 0.3786 | ambiguous | 0.3579 | ambiguous | 0.18 | Stabilizing | 0.394 | N | 0.363 | neutral | None | None | None | None | N |
D/Q | 0.2016 | likely_benign | 0.2177 | benign | 0.341 | Stabilizing | 0.752 | D | 0.361 | neutral | None | None | None | None | N |
D/R | 0.2158 | likely_benign | 0.2397 | benign | 0.572 | Stabilizing | 0.942 | D | 0.435 | neutral | None | None | None | None | N |
D/S | 0.0958 | likely_benign | 0.1067 | benign | 0.274 | Stabilizing | 0.393 | N | 0.321 | neutral | None | None | None | None | N |
D/T | 0.199 | likely_benign | 0.2195 | benign | 0.334 | Stabilizing | 0.669 | D | 0.321 | neutral | None | None | None | None | N |
D/V | 0.1989 | likely_benign | 0.2253 | benign | 0.18 | Stabilizing | 0.234 | N | 0.44 | neutral | N | 0.458213783 | None | None | N |
D/W | 0.7629 | likely_pathogenic | 0.8012 | pathogenic | -0.156 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | N |
D/Y | 0.2188 | likely_benign | 0.2602 | benign | 0.071 | Stabilizing | 0.987 | D | 0.52 | neutral | N | 0.455896378 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.