Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8782 | 26569;26570;26571 | chr2:178714430;178714429;178714428 | chr2:179579157;179579156;179579155 |
N2AB | 8465 | 25618;25619;25620 | chr2:178714430;178714429;178714428 | chr2:179579157;179579156;179579155 |
N2A | 7538 | 22837;22838;22839 | chr2:178714430;178714429;178714428 | chr2:179579157;179579156;179579155 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs727504895 | None | 0.03 | N | 0.115 | 0.094 | 0.0846915920261 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51915E-05 | None | 0 | 0 | 8.99501E-07 | 0 | 0 |
N/Y | rs1017848590 | None | 1.0 | N | 0.52 | 0.35 | 0.39724302092 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
N/Y | rs1017848590 | None | 1.0 | N | 0.52 | 0.35 | 0.39724302092 | gnomAD-4.0.0 | 9.29567E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.1867E-05 | 0 | 1.60118E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2407 | likely_benign | 0.2497 | benign | -0.883 | Destabilizing | 0.326 | N | 0.423 | neutral | None | None | None | None | N |
N/C | 0.3865 | ambiguous | 0.413 | ambiguous | 0.097 | Stabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
N/D | 0.112 | likely_benign | 0.1145 | benign | -0.136 | Destabilizing | 0.003 | N | 0.228 | neutral | N | 0.494918791 | None | None | N |
N/E | 0.3729 | ambiguous | 0.3872 | ambiguous | -0.11 | Destabilizing | 0.659 | D | 0.379 | neutral | None | None | None | None | N |
N/F | 0.5371 | ambiguous | 0.5686 | pathogenic | -0.985 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
N/G | 0.253 | likely_benign | 0.2538 | benign | -1.138 | Destabilizing | 0.837 | D | 0.402 | neutral | None | None | None | None | N |
N/H | 0.1173 | likely_benign | 0.1194 | benign | -1.039 | Destabilizing | 0.987 | D | 0.44 | neutral | N | 0.494553431 | None | None | N |
N/I | 0.2673 | likely_benign | 0.3155 | benign | -0.267 | Destabilizing | 0.997 | D | 0.578 | neutral | N | 0.456426129 | None | None | N |
N/K | 0.2885 | likely_benign | 0.3263 | benign | -0.055 | Destabilizing | 0.994 | D | 0.415 | neutral | N | 0.483141572 | None | None | N |
N/L | 0.2722 | likely_benign | 0.2917 | benign | -0.267 | Destabilizing | 0.995 | D | 0.554 | neutral | None | None | None | None | N |
N/M | 0.3694 | ambiguous | 0.3992 | ambiguous | 0.32 | Stabilizing | 1.0 | D | 0.53 | neutral | None | None | None | None | N |
N/P | 0.7293 | likely_pathogenic | 0.7299 | pathogenic | -0.445 | Destabilizing | 0.955 | D | 0.509 | neutral | None | None | None | None | N |
N/Q | 0.3378 | likely_benign | 0.3558 | ambiguous | -0.675 | Destabilizing | 0.95 | D | 0.423 | neutral | None | None | None | None | N |
N/R | 0.3161 | likely_benign | 0.339 | benign | -0.006 | Destabilizing | 0.981 | D | 0.427 | neutral | None | None | None | None | N |
N/S | 0.0864 | likely_benign | 0.0886 | benign | -0.567 | Destabilizing | 0.03 | N | 0.115 | neutral | N | 0.491147767 | None | None | N |
N/T | 0.1413 | likely_benign | 0.1388 | benign | -0.361 | Destabilizing | 0.635 | D | 0.381 | neutral | N | 0.472617827 | None | None | N |
N/V | 0.2847 | likely_benign | 0.3167 | benign | -0.445 | Destabilizing | 0.945 | D | 0.579 | neutral | None | None | None | None | N |
N/W | 0.7941 | likely_pathogenic | 0.8144 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
N/Y | 0.2031 | likely_benign | 0.2188 | benign | -0.561 | Destabilizing | 1.0 | D | 0.52 | neutral | N | 0.465642841 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.