Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8786 | 26581;26582;26583 | chr2:178714418;178714417;178714416 | chr2:179579145;179579144;179579143 |
N2AB | 8469 | 25630;25631;25632 | chr2:178714418;178714417;178714416 | chr2:179579145;179579144;179579143 |
N2A | 7542 | 22849;22850;22851 | chr2:178714418;178714417;178714416 | chr2:179579145;179579144;179579143 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.308 | N | 0.399 | 0.172 | 0.263140351381 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0869 | likely_benign | 0.0989 | benign | -0.702 | Destabilizing | 0.308 | N | 0.399 | neutral | N | 0.488668524 | None | None | N |
S/C | 0.1538 | likely_benign | 0.1973 | benign | -0.382 | Destabilizing | 0.999 | D | 0.613 | neutral | D | 0.532273775 | None | None | N |
S/D | 0.3688 | ambiguous | 0.4415 | ambiguous | 0.074 | Stabilizing | 0.975 | D | 0.455 | neutral | None | None | None | None | N |
S/E | 0.477 | ambiguous | 0.5402 | ambiguous | 0.084 | Stabilizing | 0.982 | D | 0.443 | neutral | None | None | None | None | N |
S/F | 0.1573 | likely_benign | 0.1948 | benign | -0.88 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.505522239 | None | None | N |
S/G | 0.1108 | likely_benign | 0.1312 | benign | -0.961 | Destabilizing | 0.986 | D | 0.501 | neutral | None | None | None | None | N |
S/H | 0.2846 | likely_benign | 0.3119 | benign | -1.355 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
S/I | 0.1619 | likely_benign | 0.2104 | benign | -0.119 | Destabilizing | 0.996 | D | 0.645 | neutral | None | None | None | None | N |
S/K | 0.54 | ambiguous | 0.5987 | pathogenic | -0.536 | Destabilizing | 0.986 | D | 0.444 | neutral | None | None | None | None | N |
S/L | 0.0999 | likely_benign | 0.1199 | benign | -0.119 | Destabilizing | 0.986 | D | 0.587 | neutral | None | None | None | None | N |
S/M | 0.2112 | likely_benign | 0.2474 | benign | 0.047 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
S/N | 0.1475 | likely_benign | 0.1797 | benign | -0.498 | Destabilizing | 0.821 | D | 0.468 | neutral | None | None | None | None | N |
S/P | 0.7344 | likely_pathogenic | 0.8709 | pathogenic | -0.279 | Destabilizing | 0.997 | D | 0.557 | neutral | N | 0.513827125 | None | None | N |
S/Q | 0.4372 | ambiguous | 0.4816 | ambiguous | -0.573 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
S/R | 0.4196 | ambiguous | 0.4706 | ambiguous | -0.48 | Destabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | N |
S/T | 0.0747 | likely_benign | 0.0838 | benign | -0.526 | Destabilizing | 0.01 | N | 0.174 | neutral | N | 0.450094231 | None | None | N |
S/V | 0.1789 | likely_benign | 0.2252 | benign | -0.279 | Destabilizing | 0.964 | D | 0.588 | neutral | None | None | None | None | N |
S/W | 0.2833 | likely_benign | 0.347 | ambiguous | -0.879 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
S/Y | 0.1527 | likely_benign | 0.1754 | benign | -0.599 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | N | 0.502559725 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.