Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8787 | 26584;26585;26586 | chr2:178714415;178714414;178714413 | chr2:179579142;179579141;179579140 |
N2AB | 8470 | 25633;25634;25635 | chr2:178714415;178714414;178714413 | chr2:179579142;179579141;179579140 |
N2A | 7543 | 22852;22853;22854 | chr2:178714415;178714414;178714413 | chr2:179579142;179579141;179579140 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1365431842 | -0.867 | 0.993 | N | 0.661 | 0.537 | 0.692462537607 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11346E-04 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs1365431842 | -0.867 | 0.993 | N | 0.661 | 0.537 | 0.692462537607 | gnomAD-4.0.0 | 2.05272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.55744E-05 | None | 0 | 0 | 0 | 0 | 0 |
Y/F | None | None | None | N | 0.281 | 0.142 | 0.289847578895 | gnomAD-4.0.0 | 6.8424E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99497E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4075 | ambiguous | 0.5384 | ambiguous | -1.939 | Destabilizing | 0.706 | D | 0.637 | neutral | None | None | None | None | N |
Y/C | 0.1294 | likely_benign | 0.1803 | benign | -0.891 | Destabilizing | 0.993 | D | 0.661 | neutral | N | 0.520459716 | None | None | N |
Y/D | 0.2657 | likely_benign | 0.4106 | ambiguous | -0.143 | Destabilizing | 0.864 | D | 0.684 | prob.neutral | N | 0.496822052 | None | None | N |
Y/E | 0.5988 | likely_pathogenic | 0.7409 | pathogenic | -0.056 | Destabilizing | 0.894 | D | 0.686 | prob.neutral | None | None | None | None | N |
Y/F | 0.1005 | likely_benign | 0.1035 | benign | -0.726 | Destabilizing | None | N | 0.281 | neutral | N | 0.430567108 | None | None | N |
Y/G | 0.3853 | ambiguous | 0.5159 | ambiguous | -2.258 | Highly Destabilizing | 0.706 | D | 0.673 | neutral | None | None | None | None | N |
Y/H | 0.1312 | likely_benign | 0.1726 | benign | -0.762 | Destabilizing | 0.004 | N | 0.298 | neutral | N | 0.485972726 | None | None | N |
Y/I | 0.3901 | ambiguous | 0.4922 | ambiguous | -0.994 | Destabilizing | 0.045 | N | 0.608 | neutral | None | None | None | None | N |
Y/K | 0.5052 | ambiguous | 0.6314 | pathogenic | -0.923 | Destabilizing | 0.505 | D | 0.686 | prob.neutral | None | None | None | None | N |
Y/L | 0.3703 | ambiguous | 0.4426 | ambiguous | -0.994 | Destabilizing | 0.019 | N | 0.549 | neutral | None | None | None | None | N |
Y/M | 0.5971 | likely_pathogenic | 0.6761 | pathogenic | -0.79 | Destabilizing | 0.837 | D | 0.624 | neutral | None | None | None | None | N |
Y/N | 0.1655 | likely_benign | 0.2304 | benign | -1.231 | Destabilizing | 0.761 | D | 0.684 | prob.neutral | N | 0.499464259 | None | None | N |
Y/P | 0.7933 | likely_pathogenic | 0.8862 | pathogenic | -1.301 | Destabilizing | 0.981 | D | 0.685 | prob.neutral | None | None | None | None | N |
Y/Q | 0.3964 | ambiguous | 0.5206 | ambiguous | -1.1 | Destabilizing | 0.717 | D | 0.644 | neutral | None | None | None | None | N |
Y/R | 0.3155 | likely_benign | 0.4209 | ambiguous | -0.601 | Destabilizing | 0.778 | D | 0.692 | prob.neutral | None | None | None | None | N |
Y/S | 0.1558 | likely_benign | 0.2245 | benign | -1.837 | Destabilizing | 0.645 | D | 0.68 | prob.neutral | N | 0.517319301 | None | None | N |
Y/T | 0.319 | likely_benign | 0.4224 | ambiguous | -1.649 | Destabilizing | 0.945 | D | 0.684 | prob.neutral | None | None | None | None | N |
Y/V | 0.3147 | likely_benign | 0.3953 | ambiguous | -1.301 | Destabilizing | 0.706 | D | 0.549 | neutral | None | None | None | None | N |
Y/W | 0.3611 | ambiguous | 0.4102 | ambiguous | -0.378 | Destabilizing | 0.967 | D | 0.616 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.