Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8790 | 26593;26594;26595 | chr2:178714406;178714405;178714404 | chr2:179579133;179579132;179579131 |
N2AB | 8473 | 25642;25643;25644 | chr2:178714406;178714405;178714404 | chr2:179579133;179579132;179579131 |
N2A | 7546 | 22861;22862;22863 | chr2:178714406;178714405;178714404 | chr2:179579133;179579132;179579131 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs772728050 | 0.276 | 0.048 | D | 0.394 | 0.173 | 0.211220785272 | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.07377E-04 | None | 0 | None | 0 | 0 | 0 |
N/D | rs772728050 | 0.276 | 0.048 | D | 0.394 | 0.173 | 0.211220785272 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92604E-04 | None | 0 | 0 | 0 | 0 | 0 |
N/D | rs772728050 | 0.276 | 0.048 | D | 0.394 | 0.173 | 0.211220785272 | gnomAD-4.0.0 | 2.47876E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.91107E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2562 | likely_benign | 0.3288 | benign | -0.744 | Destabilizing | 0.011 | N | 0.442 | neutral | None | None | None | None | N |
N/C | 0.3873 | ambiguous | 0.4659 | ambiguous | 0.105 | Stabilizing | 0.863 | D | 0.571 | neutral | None | None | None | None | N |
N/D | 0.1199 | likely_benign | 0.14 | benign | 0.162 | Stabilizing | 0.048 | N | 0.394 | neutral | D | 0.528093655 | None | None | N |
N/E | 0.2814 | likely_benign | 0.3424 | ambiguous | 0.234 | Stabilizing | 0.101 | N | 0.355 | neutral | None | None | None | None | N |
N/F | 0.544 | ambiguous | 0.6457 | pathogenic | -0.582 | Destabilizing | 0.746 | D | 0.56 | neutral | None | None | None | None | N |
N/G | 0.2268 | likely_benign | 0.2525 | benign | -1.052 | Destabilizing | 0.104 | N | 0.315 | neutral | None | None | None | None | N |
N/H | 0.1015 | likely_benign | 0.1141 | benign | -0.719 | Destabilizing | 0.002 | N | 0.212 | neutral | N | 0.498672158 | None | None | N |
N/I | 0.3296 | likely_benign | 0.4497 | ambiguous | 0.023 | Stabilizing | 0.454 | N | 0.562 | neutral | N | 0.498925647 | None | None | N |
N/K | 0.1551 | likely_benign | 0.1921 | benign | -0.024 | Destabilizing | 0.002 | N | 0.199 | neutral | N | 0.491693491 | None | None | N |
N/L | 0.3311 | likely_benign | 0.4171 | ambiguous | 0.023 | Stabilizing | 0.239 | N | 0.52 | neutral | None | None | None | None | N |
N/M | 0.3304 | likely_benign | 0.401 | ambiguous | 0.298 | Stabilizing | 0.962 | D | 0.543 | neutral | None | None | None | None | N |
N/P | 0.6442 | likely_pathogenic | 0.7452 | pathogenic | -0.203 | Destabilizing | 0.191 | N | 0.549 | neutral | None | None | None | None | N |
N/Q | 0.2251 | likely_benign | 0.2606 | benign | -0.509 | Destabilizing | 0.524 | D | 0.44 | neutral | None | None | None | None | N |
N/R | 0.2103 | likely_benign | 0.2547 | benign | -0.048 | Destabilizing | 0.296 | N | 0.411 | neutral | None | None | None | None | N |
N/S | 0.1174 | likely_benign | 0.1334 | benign | -0.611 | Destabilizing | None | N | 0.137 | neutral | N | 0.484869862 | None | None | N |
N/T | 0.1671 | likely_benign | 0.2059 | benign | -0.344 | Destabilizing | 0.038 | N | 0.363 | neutral | N | 0.494784591 | None | None | N |
N/V | 0.3619 | ambiguous | 0.4731 | ambiguous | -0.203 | Destabilizing | 0.084 | N | 0.529 | neutral | None | None | None | None | N |
N/W | 0.7087 | likely_pathogenic | 0.7801 | pathogenic | -0.351 | Destabilizing | 0.986 | D | 0.601 | neutral | None | None | None | None | N |
N/Y | 0.1522 | likely_benign | 0.1932 | benign | -0.147 | Destabilizing | 0.526 | D | 0.553 | neutral | N | 0.518422254 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.