Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8809 | 26650;26651;26652 | chr2:178714349;178714348;178714347 | chr2:179579076;179579075;179579074 |
N2AB | 8492 | 25699;25700;25701 | chr2:178714349;178714348;178714347 | chr2:179579076;179579075;179579074 |
N2A | 7565 | 22918;22919;22920 | chr2:178714349;178714348;178714347 | chr2:179579076;179579075;179579074 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs753253530 | -1.014 | 1.0 | D | 0.901 | 0.768 | 0.816451128208 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6428 | likely_pathogenic | 0.7522 | pathogenic | -1.325 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
C/D | 0.9973 | likely_pathogenic | 0.9991 | pathogenic | -1.509 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
C/E | 0.998 | likely_pathogenic | 0.9993 | pathogenic | -1.248 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
C/F | 0.6015 | likely_pathogenic | 0.7422 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.533885801 | None | None | N |
C/G | 0.5108 | ambiguous | 0.6742 | pathogenic | -1.686 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.558283933 | None | None | N |
C/H | 0.9853 | likely_pathogenic | 0.9944 | pathogenic | -1.906 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
C/I | 0.6374 | likely_pathogenic | 0.7366 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
C/K | 0.9982 | likely_pathogenic | 0.9994 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
C/L | 0.6116 | likely_pathogenic | 0.7089 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
C/M | 0.8655 | likely_pathogenic | 0.9122 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
C/N | 0.9791 | likely_pathogenic | 0.9922 | pathogenic | -1.531 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
C/P | 0.9949 | likely_pathogenic | 0.9975 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
C/Q | 0.9913 | likely_pathogenic | 0.9965 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
C/R | 0.9787 | likely_pathogenic | 0.9915 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.558283933 | None | None | N |
C/S | 0.7224 | likely_pathogenic | 0.855 | pathogenic | -1.755 | Destabilizing | 1.0 | D | 0.806 | deleterious | D | 0.558283933 | None | None | N |
C/T | 0.8421 | likely_pathogenic | 0.9075 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
C/V | 0.5124 | ambiguous | 0.5883 | pathogenic | -0.647 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
C/W | 0.9548 | likely_pathogenic | 0.9809 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.558283933 | None | None | N |
C/Y | 0.8789 | likely_pathogenic | 0.9453 | pathogenic | -0.946 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.558283933 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.