Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8811 | 26656;26657;26658 | chr2:178714343;178714342;178714341 | chr2:179579070;179579069;179579068 |
N2AB | 8494 | 25705;25706;25707 | chr2:178714343;178714342;178714341 | chr2:179579070;179579069;179579068 |
N2A | 7567 | 22924;22925;22926 | chr2:178714343;178714342;178714341 | chr2:179579070;179579069;179579068 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1346764958 | -2.293 | 0.001 | N | 0.261 | 0.104 | 0.327419511103 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
I/V | rs1346764958 | -2.293 | 0.001 | N | 0.261 | 0.104 | 0.327419511103 | gnomAD-4.0.0 | 4.8013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4198 | ambiguous | 0.5459 | ambiguous | -2.967 | Highly Destabilizing | 0.839 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/C | 0.8146 | likely_pathogenic | 0.8838 | pathogenic | -2.187 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
I/D | 0.9804 | likely_pathogenic | 0.994 | pathogenic | -3.622 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
I/E | 0.9528 | likely_pathogenic | 0.9832 | pathogenic | -3.369 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
I/F | 0.4256 | ambiguous | 0.597 | pathogenic | -1.693 | Destabilizing | 0.986 | D | 0.75 | deleterious | N | 0.50501526 | None | None | N |
I/G | 0.799 | likely_pathogenic | 0.9045 | pathogenic | -3.5 | Highly Destabilizing | 0.994 | D | 0.818 | deleterious | None | None | None | None | N |
I/H | 0.9534 | likely_pathogenic | 0.9846 | pathogenic | -2.949 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
I/K | 0.932 | likely_pathogenic | 0.9753 | pathogenic | -2.351 | Highly Destabilizing | 0.994 | D | 0.821 | deleterious | None | None | None | None | N |
I/L | 0.1472 | likely_benign | 0.2056 | benign | -1.385 | Destabilizing | None | N | 0.301 | neutral | N | 0.465295757 | None | None | N |
I/M | 0.1291 | likely_benign | 0.1748 | benign | -1.438 | Destabilizing | 0.565 | D | 0.709 | prob.delet. | N | 0.486911005 | None | None | N |
I/N | 0.7888 | likely_pathogenic | 0.9061 | pathogenic | -2.818 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | N | 0.50526875 | None | None | N |
I/P | 0.9828 | likely_pathogenic | 0.9944 | pathogenic | -1.901 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
I/Q | 0.909 | likely_pathogenic | 0.9658 | pathogenic | -2.627 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
I/R | 0.8936 | likely_pathogenic | 0.96 | pathogenic | -2.042 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
I/S | 0.6085 | likely_pathogenic | 0.7668 | pathogenic | -3.41 | Highly Destabilizing | 0.993 | D | 0.792 | deleterious | D | 0.533694262 | None | None | N |
I/T | 0.5266 | ambiguous | 0.7101 | pathogenic | -3.029 | Highly Destabilizing | 0.851 | D | 0.743 | deleterious | D | 0.527768368 | None | None | N |
I/V | 0.0838 | likely_benign | 0.1105 | benign | -1.901 | Destabilizing | 0.001 | N | 0.261 | neutral | N | 0.421960693 | None | None | N |
I/W | 0.9622 | likely_pathogenic | 0.9855 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
I/Y | 0.8715 | likely_pathogenic | 0.9378 | pathogenic | -1.961 | Destabilizing | 0.962 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.