Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8818 | 26677;26678;26679 | chr2:178714322;178714321;178714320 | chr2:179579049;179579048;179579047 |
N2AB | 8501 | 25726;25727;25728 | chr2:178714322;178714321;178714320 | chr2:179579049;179579048;179579047 |
N2A | 7574 | 22945;22946;22947 | chr2:178714322;178714321;178714320 | chr2:179579049;179579048;179579047 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs2077133872 | None | 0.556 | N | 0.291 | 0.233 | 0.273938319068 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/K | rs2077133872 | None | 0.556 | N | 0.291 | 0.233 | 0.273938319068 | gnomAD-4.0.0 | 2.56377E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78964E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2218 | likely_benign | 0.237 | benign | -0.739 | Destabilizing | 0.019 | N | 0.176 | neutral | None | None | None | None | I |
Q/C | 0.6507 | likely_pathogenic | 0.7099 | pathogenic | -0.07 | Destabilizing | 0.985 | D | 0.463 | neutral | None | None | None | None | I |
Q/D | 0.4494 | ambiguous | 0.4705 | ambiguous | -0.622 | Destabilizing | 0.753 | D | 0.246 | neutral | None | None | None | None | I |
Q/E | 0.0842 | likely_benign | 0.0889 | benign | -0.483 | Destabilizing | 0.567 | D | 0.307 | neutral | N | 0.512393483 | None | None | I |
Q/F | 0.7025 | likely_pathogenic | 0.7213 | pathogenic | -0.266 | Destabilizing | 0.976 | D | 0.509 | neutral | None | None | None | None | I |
Q/G | 0.2919 | likely_benign | 0.3237 | benign | -1.122 | Destabilizing | 0.677 | D | 0.427 | neutral | None | None | None | None | I |
Q/H | 0.2386 | likely_benign | 0.2522 | benign | -0.763 | Destabilizing | 0.985 | D | 0.425 | neutral | N | 0.498988099 | None | None | I |
Q/I | 0.389 | ambiguous | 0.4109 | ambiguous | 0.263 | Stabilizing | 0.669 | D | 0.487 | neutral | None | None | None | None | I |
Q/K | 0.1023 | likely_benign | 0.1042 | benign | -0.436 | Destabilizing | 0.556 | D | 0.291 | neutral | N | 0.501965846 | None | None | I |
Q/L | 0.1472 | likely_benign | 0.1525 | benign | 0.263 | Stabilizing | 0.386 | N | 0.425 | neutral | N | 0.518455451 | None | None | I |
Q/M | 0.3822 | ambiguous | 0.3876 | ambiguous | 0.497 | Stabilizing | 0.966 | D | 0.407 | neutral | None | None | None | None | I |
Q/N | 0.3639 | ambiguous | 0.3692 | ambiguous | -0.955 | Destabilizing | 0.753 | D | 0.273 | neutral | None | None | None | None | I |
Q/P | 0.556 | ambiguous | 0.6062 | pathogenic | -0.042 | Destabilizing | 0.823 | D | 0.507 | neutral | D | 0.532886186 | None | None | I |
Q/R | 0.0977 | likely_benign | 0.1032 | benign | -0.383 | Destabilizing | 0.801 | D | 0.313 | neutral | N | 0.442149538 | None | None | I |
Q/S | 0.3189 | likely_benign | 0.3242 | benign | -1.106 | Destabilizing | 0.142 | N | 0.077 | neutral | None | None | None | None | I |
Q/T | 0.2319 | likely_benign | 0.2458 | benign | -0.776 | Destabilizing | 0.075 | N | 0.394 | neutral | None | None | None | None | I |
Q/V | 0.2508 | likely_benign | 0.2614 | benign | -0.042 | Destabilizing | 0.007 | N | 0.267 | neutral | None | None | None | None | I |
Q/W | 0.5029 | ambiguous | 0.5295 | ambiguous | -0.181 | Destabilizing | 0.999 | D | 0.472 | neutral | None | None | None | None | I |
Q/Y | 0.4708 | ambiguous | 0.4968 | ambiguous | 0.048 | Stabilizing | 0.992 | D | 0.497 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.