Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8825 | 26698;26699;26700 | chr2:178714301;178714300;178714299 | chr2:179579028;179579027;179579026 |
N2AB | 8508 | 25747;25748;25749 | chr2:178714301;178714300;178714299 | chr2:179579028;179579027;179579026 |
N2A | 7581 | 22966;22967;22968 | chr2:178714301;178714300;178714299 | chr2:179579028;179579027;179579026 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs2077128629 | None | 0.017 | N | 0.417 | 0.297 | 0.569067374492 | gnomAD-4.0.0 | 1.59566E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.775E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0706 | likely_benign | 0.081 | benign | -0.686 | Destabilizing | None | N | 0.091 | neutral | N | 0.495501234 | None | None | N |
S/C | 0.1318 | likely_benign | 0.1667 | benign | -0.457 | Destabilizing | 0.981 | D | 0.453 | neutral | N | 0.495963133 | None | None | N |
S/D | 0.2801 | likely_benign | 0.2865 | benign | 0.234 | Stabilizing | 0.296 | N | 0.33 | neutral | None | None | None | None | N |
S/E | 0.3705 | ambiguous | 0.3633 | ambiguous | 0.177 | Stabilizing | 0.37 | N | 0.307 | neutral | None | None | None | None | N |
S/F | 0.1194 | likely_benign | 0.1325 | benign | -1.082 | Destabilizing | 0.017 | N | 0.417 | neutral | N | 0.488872788 | None | None | N |
S/G | 0.1112 | likely_benign | 0.12 | benign | -0.854 | Destabilizing | 0.244 | N | 0.332 | neutral | None | None | None | None | N |
S/H | 0.2133 | likely_benign | 0.2066 | benign | -1.368 | Destabilizing | 0.957 | D | 0.473 | neutral | None | None | None | None | N |
S/I | 0.1182 | likely_benign | 0.1354 | benign | -0.357 | Destabilizing | 0.759 | D | 0.521 | neutral | None | None | None | None | N |
S/K | 0.4171 | ambiguous | 0.4136 | ambiguous | -0.528 | Destabilizing | 0.01 | N | 0.16 | neutral | None | None | None | None | N |
S/L | 0.0738 | likely_benign | 0.0822 | benign | -0.357 | Destabilizing | 0.394 | N | 0.502 | neutral | None | None | None | None | N |
S/M | 0.1469 | likely_benign | 0.1595 | benign | -0.064 | Destabilizing | 0.986 | D | 0.47 | neutral | None | None | None | None | N |
S/N | 0.1043 | likely_benign | 0.104 | benign | -0.312 | Destabilizing | 0.001 | N | 0.193 | neutral | None | None | None | None | N |
S/P | 0.5639 | ambiguous | 0.6594 | pathogenic | -0.437 | Destabilizing | 0.819 | D | 0.489 | neutral | N | 0.506977043 | None | None | N |
S/Q | 0.3396 | likely_benign | 0.3331 | benign | -0.555 | Destabilizing | 0.917 | D | 0.397 | neutral | None | None | None | None | N |
S/R | 0.3366 | likely_benign | 0.324 | benign | -0.4 | Destabilizing | 0.611 | D | 0.483 | neutral | None | None | None | None | N |
S/T | 0.0616 | likely_benign | 0.064 | benign | -0.455 | Destabilizing | None | N | 0.091 | neutral | N | 0.409439687 | None | None | N |
S/V | 0.1268 | likely_benign | 0.1519 | benign | -0.437 | Destabilizing | 0.37 | N | 0.523 | neutral | None | None | None | None | N |
S/W | 0.2301 | likely_benign | 0.2315 | benign | -1.0 | Destabilizing | 0.996 | D | 0.545 | neutral | None | None | None | None | N |
S/Y | 0.1206 | likely_benign | 0.1261 | benign | -0.751 | Destabilizing | 0.806 | D | 0.525 | neutral | N | 0.489126278 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.