Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8826 | 26701;26702;26703 | chr2:178714298;178714297;178714296 | chr2:179579025;179579024;179579023 |
N2AB | 8509 | 25750;25751;25752 | chr2:178714298;178714297;178714296 | chr2:179579025;179579024;179579023 |
N2A | 7582 | 22969;22970;22971 | chr2:178714298;178714297;178714296 | chr2:179579025;179579024;179579023 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs200116046 | -0.82 | 0.001 | N | 0.471 | 0.258 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
V/I | rs200116046 | -0.82 | 0.001 | N | 0.471 | 0.258 | None | gnomAD-4.0.0 | 2.74088E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70241E-06 | 1.16085E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4163 | ambiguous | 0.4988 | ambiguous | -1.573 | Destabilizing | 0.298 | N | 0.616 | neutral | D | 0.631519556 | None | None | N |
V/C | 0.8357 | likely_pathogenic | 0.8864 | pathogenic | -1.256 | Destabilizing | 0.979 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/D | 0.8927 | likely_pathogenic | 0.9324 | pathogenic | -1.11 | Destabilizing | 0.881 | D | 0.74 | deleterious | D | 0.632124969 | None | None | N |
V/E | 0.8153 | likely_pathogenic | 0.8669 | pathogenic | -1.071 | Destabilizing | 0.615 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/F | 0.3268 | likely_benign | 0.4019 | ambiguous | -1.164 | Destabilizing | 0.875 | D | 0.725 | prob.delet. | D | 0.631519556 | None | None | N |
V/G | 0.6087 | likely_pathogenic | 0.6804 | pathogenic | -1.92 | Destabilizing | 0.91 | D | 0.725 | prob.delet. | D | 0.632124969 | None | None | N |
V/H | 0.9141 | likely_pathogenic | 0.9488 | pathogenic | -1.434 | Destabilizing | 0.984 | D | 0.725 | prob.delet. | None | None | None | None | N |
V/I | 0.0654 | likely_benign | 0.0733 | benign | -0.706 | Destabilizing | 0.001 | N | 0.471 | neutral | N | 0.504763268 | None | None | N |
V/K | 0.867 | likely_pathogenic | 0.9079 | pathogenic | -1.131 | Destabilizing | 0.777 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/L | 0.1854 | likely_benign | 0.2544 | benign | -0.706 | Destabilizing | 0.012 | N | 0.641 | neutral | D | 0.629501513 | None | None | N |
V/M | 0.221 | likely_benign | 0.2787 | benign | -0.705 | Destabilizing | 0.724 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/N | 0.7115 | likely_pathogenic | 0.8093 | pathogenic | -1.001 | Destabilizing | 0.611 | D | 0.745 | deleterious | None | None | None | None | N |
V/P | 0.8205 | likely_pathogenic | 0.8626 | pathogenic | -0.961 | Destabilizing | 0.611 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/Q | 0.8235 | likely_pathogenic | 0.8748 | pathogenic | -1.116 | Destabilizing | 0.883 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/R | 0.8127 | likely_pathogenic | 0.8674 | pathogenic | -0.76 | Destabilizing | 0.881 | D | 0.743 | deleterious | None | None | None | None | N |
V/S | 0.5612 | ambiguous | 0.6526 | pathogenic | -1.645 | Destabilizing | 0.8 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/T | 0.4699 | ambiguous | 0.5466 | ambiguous | -1.487 | Destabilizing | 0.185 | N | 0.699 | prob.neutral | None | None | None | None | N |
V/W | 0.9446 | likely_pathogenic | 0.9677 | pathogenic | -1.336 | Destabilizing | 0.996 | D | 0.686 | prob.neutral | None | None | None | None | N |
V/Y | 0.7997 | likely_pathogenic | 0.8667 | pathogenic | -1.02 | Destabilizing | 0.881 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.