Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8833 | 26722;26723;26724 | chr2:178714161;178714160;178714159 | chr2:179578888;179578887;179578886 |
N2AB | 8516 | 25771;25772;25773 | chr2:178714161;178714160;178714159 | chr2:179578888;179578887;179578886 |
N2A | 7589 | 22990;22991;22992 | chr2:178714161;178714160;178714159 | chr2:179578888;179578887;179578886 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1316360664 | -0.213 | 0.001 | N | 0.069 | 0.09 | 0.141422826196 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.39E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1178 | likely_benign | 0.132 | benign | -0.775 | Destabilizing | 0.505 | D | 0.398 | neutral | N | 0.460376149 | None | None | N |
V/C | 0.6753 | likely_pathogenic | 0.7296 | pathogenic | -0.709 | Destabilizing | 0.991 | D | 0.48 | neutral | None | None | None | None | N |
V/D | 0.2984 | likely_benign | 0.3372 | benign | -0.567 | Destabilizing | 0.967 | D | 0.569 | neutral | None | None | None | None | N |
V/E | 0.1847 | likely_benign | 0.2162 | benign | -0.668 | Destabilizing | 0.879 | D | 0.566 | neutral | N | 0.50771473 | None | None | N |
V/F | 0.1395 | likely_benign | 0.1501 | benign | -0.843 | Destabilizing | 0.01 | N | 0.225 | neutral | None | None | None | None | N |
V/G | 0.1803 | likely_benign | 0.2078 | benign | -0.947 | Destabilizing | 0.879 | D | 0.55 | neutral | N | 0.479747851 | None | None | N |
V/H | 0.4155 | ambiguous | 0.4598 | ambiguous | -0.431 | Destabilizing | 0.991 | D | 0.583 | neutral | None | None | None | None | N |
V/I | 0.0671 | likely_benign | 0.0668 | benign | -0.462 | Destabilizing | 0.003 | N | 0.149 | neutral | N | 0.425520208 | None | None | N |
V/K | 0.2034 | likely_benign | 0.2346 | benign | -0.708 | Destabilizing | 0.906 | D | 0.558 | neutral | None | None | None | None | N |
V/L | 0.1092 | likely_benign | 0.1105 | benign | -0.462 | Destabilizing | 0.001 | N | 0.069 | neutral | N | 0.447068916 | None | None | N |
V/M | 0.0938 | likely_benign | 0.1086 | benign | -0.402 | Destabilizing | 0.826 | D | 0.437 | neutral | None | None | None | None | N |
V/N | 0.2334 | likely_benign | 0.2647 | benign | -0.451 | Destabilizing | 0.967 | D | 0.577 | neutral | None | None | None | None | N |
V/P | 0.6436 | likely_pathogenic | 0.6464 | pathogenic | -0.531 | Destabilizing | 0.967 | D | 0.547 | neutral | None | None | None | None | N |
V/Q | 0.2028 | likely_benign | 0.232 | benign | -0.714 | Destabilizing | 0.967 | D | 0.549 | neutral | None | None | None | None | N |
V/R | 0.1611 | likely_benign | 0.1824 | benign | -0.107 | Destabilizing | 0.906 | D | 0.577 | neutral | None | None | None | None | N |
V/S | 0.1527 | likely_benign | 0.1732 | benign | -0.841 | Destabilizing | 0.906 | D | 0.493 | neutral | None | None | None | None | N |
V/T | 0.0979 | likely_benign | 0.1103 | benign | -0.842 | Destabilizing | 0.575 | D | 0.403 | neutral | None | None | None | None | N |
V/W | 0.5898 | likely_pathogenic | 0.6498 | pathogenic | -0.916 | Destabilizing | 0.991 | D | 0.624 | neutral | None | None | None | None | N |
V/Y | 0.4372 | ambiguous | 0.4679 | ambiguous | -0.642 | Destabilizing | 0.704 | D | 0.463 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.