Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8837 | 26734;26735;26736 | chr2:178714149;178714148;178714147 | chr2:179578876;179578875;179578874 |
N2AB | 8520 | 25783;25784;25785 | chr2:178714149;178714148;178714147 | chr2:179578876;179578875;179578874 |
N2A | 7593 | 23002;23003;23004 | chr2:178714149;178714148;178714147 | chr2:179578876;179578875;179578874 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.309 | N | 0.361 | 0.129 | 0.477451190609 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/D | rs1457622129 | None | 0.003 | D | 0.132 | 0.131 | 0.252681307341 | gnomAD-4.0.0 | 1.59607E-06 | None | None | None | None | N | None | 5.70841E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0909 | likely_benign | 0.0881 | benign | -0.122 | Destabilizing | 0.309 | N | 0.361 | neutral | N | 0.520071604 | None | None | N |
E/C | 0.6604 | likely_pathogenic | 0.6442 | pathogenic | -0.272 | Destabilizing | 0.996 | D | 0.341 | neutral | None | None | None | None | N |
E/D | 0.098 | likely_benign | 0.1069 | benign | -0.367 | Destabilizing | 0.003 | N | 0.132 | neutral | D | 0.525189422 | None | None | N |
E/F | 0.4851 | ambiguous | 0.4832 | ambiguous | -0.108 | Destabilizing | 0.984 | D | 0.372 | neutral | None | None | None | None | N |
E/G | 0.0897 | likely_benign | 0.0857 | benign | -0.248 | Destabilizing | 0.003 | N | 0.21 | neutral | N | 0.496608243 | None | None | N |
E/H | 0.2789 | likely_benign | 0.2721 | benign | 0.526 | Stabilizing | 0.984 | D | 0.392 | neutral | None | None | None | None | N |
E/I | 0.1978 | likely_benign | 0.2033 | benign | 0.158 | Stabilizing | 0.91 | D | 0.391 | neutral | None | None | None | None | N |
E/K | 0.0848 | likely_benign | 0.0849 | benign | 0.34 | Stabilizing | 0.684 | D | 0.378 | neutral | N | 0.491092704 | None | None | N |
E/L | 0.2119 | likely_benign | 0.2216 | benign | 0.158 | Stabilizing | 0.742 | D | 0.421 | neutral | None | None | None | None | N |
E/M | 0.2918 | likely_benign | 0.2923 | benign | -0.065 | Destabilizing | 0.996 | D | 0.348 | neutral | None | None | None | None | N |
E/N | 0.1497 | likely_benign | 0.1545 | benign | 0.043 | Stabilizing | 0.59 | D | 0.347 | neutral | None | None | None | None | N |
E/P | 0.3268 | likely_benign | 0.3222 | benign | 0.083 | Stabilizing | 0.953 | D | 0.39 | neutral | None | None | None | None | N |
E/Q | 0.0941 | likely_benign | 0.0942 | benign | 0.059 | Stabilizing | 0.815 | D | 0.392 | neutral | N | 0.50331264 | None | None | N |
E/R | 0.1391 | likely_benign | 0.1318 | benign | 0.628 | Stabilizing | 0.953 | D | 0.389 | neutral | None | None | None | None | N |
E/S | 0.1112 | likely_benign | 0.1045 | benign | -0.09 | Destabilizing | 0.101 | N | 0.166 | neutral | None | None | None | None | N |
E/T | 0.1336 | likely_benign | 0.1326 | benign | 0.022 | Stabilizing | 0.037 | N | 0.174 | neutral | None | None | None | None | N |
E/V | 0.1229 | likely_benign | 0.1238 | benign | 0.083 | Stabilizing | 0.684 | D | 0.429 | neutral | N | 0.519244885 | None | None | N |
E/W | 0.7087 | likely_pathogenic | 0.7077 | pathogenic | -0.031 | Destabilizing | 0.996 | D | 0.39 | neutral | None | None | None | None | N |
E/Y | 0.3758 | ambiguous | 0.3734 | ambiguous | 0.121 | Stabilizing | 0.984 | D | 0.373 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.