Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8839 | 26740;26741;26742 | chr2:178714143;178714142;178714141 | chr2:179578870;179578869;179578868 |
N2AB | 8522 | 25789;25790;25791 | chr2:178714143;178714142;178714141 | chr2:179578870;179578869;179578868 |
N2A | 7595 | 23008;23009;23010 | chr2:178714143;178714142;178714141 | chr2:179578870;179578869;179578868 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.001 | N | 0.133 | 0.107 | 0.171388866994 | gnomAD-4.0.0 | 1.369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99683E-07 | 0 | 1.65717E-05 |
I/T | None | None | 0.001 | N | 0.179 | 0.184 | 0.665430918054 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | None | None | None | N | 0.056 | 0.174 | 0.418718287753 | gnomAD-4.0.0 | 2.05351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69906E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2225 | likely_benign | 0.2024 | benign | -1.365 | Destabilizing | 0.025 | N | 0.295 | neutral | None | None | None | None | N |
I/C | 0.5409 | ambiguous | 0.5096 | ambiguous | -0.859 | Destabilizing | 0.667 | D | 0.353 | neutral | None | None | None | None | N |
I/D | 0.6279 | likely_pathogenic | 0.5678 | pathogenic | -0.536 | Destabilizing | 0.22 | N | 0.527 | neutral | None | None | None | None | N |
I/E | 0.4216 | ambiguous | 0.3411 | ambiguous | -0.542 | Destabilizing | 0.22 | N | 0.485 | neutral | None | None | None | None | N |
I/F | 0.118 | likely_benign | 0.1128 | benign | -0.909 | Destabilizing | 0.22 | N | 0.274 | neutral | None | None | None | None | N |
I/G | 0.4397 | ambiguous | 0.4133 | ambiguous | -1.672 | Destabilizing | 0.22 | N | 0.467 | neutral | None | None | None | None | N |
I/H | 0.3975 | ambiguous | 0.3504 | ambiguous | -0.87 | Destabilizing | 0.859 | D | 0.407 | neutral | None | None | None | None | N |
I/K | 0.2576 | likely_benign | 0.1802 | benign | -0.87 | Destabilizing | 0.175 | N | 0.469 | neutral | N | 0.511049476 | None | None | N |
I/L | 0.0784 | likely_benign | 0.0758 | benign | -0.616 | Destabilizing | None | N | 0.052 | neutral | N | 0.445861847 | None | None | N |
I/M | 0.07 | likely_benign | 0.0621 | benign | -0.541 | Destabilizing | 0.001 | N | 0.133 | neutral | N | 0.503160712 | None | None | N |
I/N | 0.2551 | likely_benign | 0.2167 | benign | -0.668 | Destabilizing | 0.497 | N | 0.516 | neutral | None | None | None | None | N |
I/P | 0.7212 | likely_pathogenic | 0.7204 | pathogenic | -0.833 | Destabilizing | 0.667 | D | 0.521 | neutral | None | None | None | None | N |
I/Q | 0.2731 | likely_benign | 0.206 | benign | -0.818 | Destabilizing | 0.667 | D | 0.505 | neutral | None | None | None | None | N |
I/R | 0.1812 | likely_benign | 0.1287 | benign | -0.339 | Destabilizing | 0.427 | N | 0.521 | neutral | N | 0.511396193 | None | None | N |
I/S | 0.223 | likely_benign | 0.1867 | benign | -1.296 | Destabilizing | 0.055 | N | 0.387 | neutral | None | None | None | None | N |
I/T | 0.1657 | likely_benign | 0.1308 | benign | -1.179 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.498677612 | None | None | N |
I/V | 0.0633 | likely_benign | 0.0644 | benign | -0.833 | Destabilizing | None | N | 0.056 | neutral | N | 0.44435755 | None | None | N |
I/W | 0.5705 | likely_pathogenic | 0.5398 | ambiguous | -0.956 | Destabilizing | 0.958 | D | 0.417 | neutral | None | None | None | None | N |
I/Y | 0.3527 | ambiguous | 0.3228 | benign | -0.731 | Destabilizing | 0.667 | D | 0.437 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.