Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8846 | 26761;26762;26763 | chr2:178714122;178714121;178714120 | chr2:179578849;179578848;179578847 |
N2AB | 8529 | 25810;25811;25812 | chr2:178714122;178714121;178714120 | chr2:179578849;179578848;179578847 |
N2A | 7602 | 23029;23030;23031 | chr2:178714122;178714121;178714120 | chr2:179578849;179578848;179578847 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs780494547 | -0.391 | 0.642 | N | 0.285 | 0.163 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/S | None | None | 0.01 | N | 0.103 | 0.044 | 0.146414634003 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0755 | likely_benign | 0.0795 | benign | -0.745 | Destabilizing | 0.27 | N | 0.248 | neutral | N | 0.451034728 | None | None | N |
T/C | 0.4391 | ambiguous | 0.4422 | ambiguous | -0.395 | Destabilizing | 0.995 | D | 0.36 | neutral | None | None | None | None | N |
T/D | 0.401 | ambiguous | 0.4284 | ambiguous | -0.055 | Destabilizing | 0.704 | D | 0.37 | neutral | None | None | None | None | N |
T/E | 0.4094 | ambiguous | 0.4174 | ambiguous | -0.069 | Destabilizing | 0.704 | D | 0.319 | neutral | None | None | None | None | N |
T/F | 0.2072 | likely_benign | 0.232 | benign | -0.89 | Destabilizing | 0.944 | D | 0.395 | neutral | None | None | None | None | N |
T/G | 0.2353 | likely_benign | 0.2554 | benign | -0.987 | Destabilizing | 0.543 | D | 0.331 | neutral | None | None | None | None | N |
T/H | 0.2648 | likely_benign | 0.2993 | benign | -1.262 | Destabilizing | 0.981 | D | 0.345 | neutral | None | None | None | None | N |
T/I | 0.1344 | likely_benign | 0.1541 | benign | -0.2 | Destabilizing | 0.01 | N | 0.141 | neutral | N | 0.50829352 | None | None | N |
T/K | 0.3017 | likely_benign | 0.3227 | benign | -0.641 | Destabilizing | 0.031 | N | 0.182 | neutral | None | None | None | None | N |
T/L | 0.104 | likely_benign | 0.113 | benign | -0.2 | Destabilizing | 0.329 | N | 0.339 | neutral | None | None | None | None | N |
T/M | 0.0943 | likely_benign | 0.1023 | benign | 0.105 | Stabilizing | 0.176 | N | 0.281 | neutral | None | None | None | None | N |
T/N | 0.1082 | likely_benign | 0.1225 | benign | -0.529 | Destabilizing | 0.642 | D | 0.285 | neutral | N | 0.459691496 | None | None | N |
T/P | 0.088 | likely_benign | 0.0961 | benign | -0.349 | Destabilizing | 0.927 | D | 0.386 | neutral | N | 0.424405487 | None | None | N |
T/Q | 0.2895 | likely_benign | 0.3086 | benign | -0.704 | Destabilizing | 0.893 | D | 0.398 | neutral | None | None | None | None | N |
T/R | 0.2262 | likely_benign | 0.2409 | benign | -0.394 | Destabilizing | 0.543 | D | 0.369 | neutral | None | None | None | None | N |
T/S | 0.0903 | likely_benign | 0.0991 | benign | -0.819 | Destabilizing | 0.01 | N | 0.103 | neutral | N | 0.402912707 | None | None | N |
T/V | 0.1218 | likely_benign | 0.1375 | benign | -0.349 | Destabilizing | 0.329 | N | 0.283 | neutral | None | None | None | None | N |
T/W | 0.6225 | likely_pathogenic | 0.6239 | pathogenic | -0.825 | Destabilizing | 0.995 | D | 0.383 | neutral | None | None | None | None | N |
T/Y | 0.2489 | likely_benign | 0.2622 | benign | -0.591 | Destabilizing | 0.981 | D | 0.366 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.