Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8849 | 26770;26771;26772 | chr2:178714113;178714112;178714111 | chr2:179578840;179578839;179578838 |
N2AB | 8532 | 25819;25820;25821 | chr2:178714113;178714112;178714111 | chr2:179578840;179578839;179578838 |
N2A | 7605 | 23038;23039;23040 | chr2:178714113;178714112;178714111 | chr2:179578840;179578839;179578838 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.64 | N | 0.446 | 0.176 | 0.514866526686 | gnomAD-4.0.0 | 1.20035E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31254E-06 | 0 | 0 |
L/W | None | None | 1.0 | D | 0.867 | 0.764 | 0.893513305282 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7804 | likely_pathogenic | 0.796 | pathogenic | -2.658 | Highly Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
L/C | 0.8821 | likely_pathogenic | 0.8909 | pathogenic | -1.95 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/D | 0.9964 | likely_pathogenic | 0.9973 | pathogenic | -3.212 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.9725 | likely_pathogenic | 0.9779 | pathogenic | -2.904 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/F | 0.1348 | likely_benign | 0.1443 | benign | -1.533 | Destabilizing | 0.64 | D | 0.446 | neutral | N | 0.510721402 | None | None | N |
L/G | 0.9682 | likely_pathogenic | 0.9713 | pathogenic | -3.277 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/H | 0.9178 | likely_pathogenic | 0.9342 | pathogenic | -2.867 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/I | 0.1279 | likely_benign | 0.1294 | benign | -0.813 | Destabilizing | 0.997 | D | 0.647 | neutral | None | None | None | None | N |
L/K | 0.9524 | likely_pathogenic | 0.9614 | pathogenic | -1.998 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/M | 0.1355 | likely_benign | 0.1414 | benign | -0.916 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.556432163 | None | None | N |
L/N | 0.9841 | likely_pathogenic | 0.9869 | pathogenic | -2.578 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
L/P | 0.9863 | likely_pathogenic | 0.9875 | pathogenic | -1.416 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/Q | 0.8861 | likely_pathogenic | 0.9091 | pathogenic | -2.283 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
L/R | 0.9086 | likely_pathogenic | 0.9252 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/S | 0.9403 | likely_pathogenic | 0.9515 | pathogenic | -3.246 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.639364946 | None | None | N |
L/T | 0.8351 | likely_pathogenic | 0.8481 | pathogenic | -2.768 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/V | 0.1602 | likely_benign | 0.1607 | benign | -1.416 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | D | 0.570099517 | None | None | N |
L/W | 0.5144 | ambiguous | 0.5728 | pathogenic | -1.953 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.602218602 | None | None | N |
L/Y | 0.722 | likely_pathogenic | 0.7645 | pathogenic | -1.687 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.