Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8852 | 26779;26780;26781 | chr2:178714104;178714103;178714102 | chr2:179578831;179578830;179578829 |
N2AB | 8535 | 25828;25829;25830 | chr2:178714104;178714103;178714102 | chr2:179578831;179578830;179578829 |
N2A | 7608 | 23047;23048;23049 | chr2:178714104;178714103;178714102 | chr2:179578831;179578830;179578829 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs777360482 | None | None | N | 0.345 | 0.12 | 0.29132392195 | gnomAD-4.0.0 | 6.8426E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73491E-04 | 0 | 0 | 0 |
T/K | rs777360482 | -0.575 | None | N | 0.207 | 0.132 | 0.254761474806 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
T/K | rs777360482 | -0.575 | None | N | 0.207 | 0.132 | 0.254761474806 | gnomAD-4.0.0 | 3.4213E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47858E-05 | 3.31378E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0768 | likely_benign | 0.0761 | benign | -0.964 | Destabilizing | None | N | 0.153 | neutral | N | 0.486633821 | None | None | N |
T/C | 0.3688 | ambiguous | 0.4041 | ambiguous | -0.78 | Destabilizing | 0.356 | N | 0.486 | neutral | None | None | None | None | N |
T/D | 0.3805 | ambiguous | 0.4088 | ambiguous | -0.633 | Destabilizing | 0.038 | N | 0.454 | neutral | None | None | None | None | N |
T/E | 0.2409 | likely_benign | 0.255 | benign | -0.585 | Destabilizing | 0.038 | N | 0.455 | neutral | None | None | None | None | N |
T/F | 0.169 | likely_benign | 0.1846 | benign | -0.86 | Destabilizing | 0.214 | N | 0.566 | neutral | None | None | None | None | N |
T/G | 0.2519 | likely_benign | 0.2682 | benign | -1.264 | Destabilizing | 0.016 | N | 0.451 | neutral | None | None | None | None | N |
T/H | 0.2024 | likely_benign | 0.2147 | benign | -1.482 | Destabilizing | 0.356 | N | 0.519 | neutral | None | None | None | None | N |
T/I | 0.0902 | likely_benign | 0.1051 | benign | -0.239 | Destabilizing | None | N | 0.345 | neutral | N | 0.490098201 | None | None | N |
T/K | 0.1281 | likely_benign | 0.1243 | benign | -0.826 | Destabilizing | None | N | 0.207 | neutral | N | 0.437839797 | None | None | N |
T/L | 0.0693 | likely_benign | 0.0755 | benign | -0.239 | Destabilizing | 0.002 | N | 0.357 | neutral | None | None | None | None | N |
T/M | 0.0728 | likely_benign | 0.0834 | benign | -0.061 | Destabilizing | 0.002 | N | 0.341 | neutral | None | None | None | None | N |
T/N | 0.1265 | likely_benign | 0.1325 | benign | -0.933 | Destabilizing | 0.038 | N | 0.379 | neutral | None | None | None | None | N |
T/P | 0.2214 | likely_benign | 0.2335 | benign | -0.449 | Destabilizing | 0.055 | N | 0.523 | neutral | N | 0.506259732 | None | None | N |
T/Q | 0.172 | likely_benign | 0.186 | benign | -1.056 | Destabilizing | 0.072 | N | 0.553 | neutral | None | None | None | None | N |
T/R | 0.097 | likely_benign | 0.1011 | benign | -0.645 | Destabilizing | 0.029 | N | 0.501 | neutral | N | 0.452790606 | None | None | N |
T/S | 0.1061 | likely_benign | 0.1098 | benign | -1.214 | Destabilizing | None | N | 0.153 | neutral | N | 0.462487525 | None | None | N |
T/V | 0.0791 | likely_benign | 0.088 | benign | -0.449 | Destabilizing | None | N | 0.152 | neutral | None | None | None | None | N |
T/W | 0.4606 | ambiguous | 0.5207 | ambiguous | -0.794 | Destabilizing | 0.864 | D | 0.544 | neutral | None | None | None | None | N |
T/Y | 0.2213 | likely_benign | 0.2397 | benign | -0.547 | Destabilizing | 0.356 | N | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.