Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8853 | 26782;26783;26784 | chr2:178714101;178714100;178714099 | chr2:179578828;179578827;179578826 |
N2AB | 8536 | 25831;25832;25833 | chr2:178714101;178714100;178714099 | chr2:179578828;179578827;179578826 |
N2A | 7609 | 23050;23051;23052 | chr2:178714101;178714100;178714099 | chr2:179578828;179578827;179578826 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.948 | N | 0.589 | 0.287 | 0.597372938306 | gnomAD-4.0.0 | 6.84261E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99502E-07 | 0 | 0 |
V/L | rs757381520 | -0.19 | 0.9 | D | 0.627 | 0.348 | 0.587811542155 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 4.44E-05 | 0 |
V/L | rs757381520 | -0.19 | 0.9 | D | 0.627 | 0.348 | 0.587811542155 | gnomAD-4.0.0 | 6.84261E-06 | None | None | None | None | N | None | 0 | 2.23724E-05 | None | 0 | 0 | None | 0 | 0 | 8.09552E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3402 | ambiguous | 0.4009 | ambiguous | -1.654 | Destabilizing | 0.989 | D | 0.661 | neutral | N | 0.50324643 | None | None | N |
V/C | 0.9402 | likely_pathogenic | 0.9638 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
V/D | 0.9865 | likely_pathogenic | 0.9916 | pathogenic | -1.924 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
V/E | 0.9602 | likely_pathogenic | 0.9718 | pathogenic | -1.692 | Destabilizing | 0.999 | D | 0.813 | deleterious | D | 0.621286464 | None | None | N |
V/F | 0.5899 | likely_pathogenic | 0.675 | pathogenic | -0.898 | Destabilizing | 0.154 | N | 0.436 | neutral | None | None | None | None | N |
V/G | 0.7274 | likely_pathogenic | 0.7936 | pathogenic | -2.208 | Highly Destabilizing | 0.999 | D | 0.816 | deleterious | D | 0.565566947 | None | None | N |
V/H | 0.9849 | likely_pathogenic | 0.9909 | pathogenic | -2.013 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/I | 0.1058 | likely_benign | 0.1216 | benign | -0.115 | Destabilizing | 0.948 | D | 0.589 | neutral | N | 0.515903509 | None | None | N |
V/K | 0.975 | likely_pathogenic | 0.9824 | pathogenic | -1.242 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
V/L | 0.4937 | ambiguous | 0.5936 | pathogenic | -0.115 | Destabilizing | 0.9 | D | 0.627 | neutral | D | 0.536123115 | None | None | N |
V/M | 0.4005 | ambiguous | 0.5183 | ambiguous | -0.307 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/N | 0.9602 | likely_pathogenic | 0.9762 | pathogenic | -1.591 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
V/P | 0.9786 | likely_pathogenic | 0.9859 | pathogenic | -0.599 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
V/Q | 0.9599 | likely_pathogenic | 0.9717 | pathogenic | -1.376 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
V/R | 0.9536 | likely_pathogenic | 0.9651 | pathogenic | -1.245 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
V/S | 0.7257 | likely_pathogenic | 0.7996 | pathogenic | -2.263 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
V/T | 0.4702 | ambiguous | 0.5482 | ambiguous | -1.872 | Destabilizing | 0.997 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/W | 0.988 | likely_pathogenic | 0.9935 | pathogenic | -1.402 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/Y | 0.9567 | likely_pathogenic | 0.9722 | pathogenic | -0.953 | Destabilizing | 0.99 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.