Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8858 | 26797;26798;26799 | chr2:178714086;178714085;178714084 | chr2:179578813;179578812;179578811 |
N2AB | 8541 | 25846;25847;25848 | chr2:178714086;178714085;178714084 | chr2:179578813;179578812;179578811 |
N2A | 7614 | 23065;23066;23067 | chr2:178714086;178714085;178714084 | chr2:179578813;179578812;179578811 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.989 | D | 0.517 | 0.264 | 0.393471546983 | gnomAD-4.0.0 | 1.59157E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85858E-06 | 0 | 0 |
E/Q | rs751498825 | 0.251 | 0.978 | N | 0.535 | 0.255 | 0.385417323374 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs751498825 | 0.251 | 0.978 | N | 0.535 | 0.255 | 0.385417323374 | gnomAD-4.0.0 | 1.59163E-06 | None | None | None | None | I | None | 0 | 2.28812E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1774 | likely_benign | 0.1617 | benign | -0.105 | Destabilizing | 0.978 | D | 0.618 | neutral | N | 0.502987353 | None | None | I |
E/C | 0.9123 | likely_pathogenic | 0.8968 | pathogenic | -0.189 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
E/D | 0.1727 | likely_benign | 0.1625 | benign | -0.25 | Destabilizing | 0.989 | D | 0.517 | neutral | D | 0.527709653 | None | None | I |
E/F | 0.779 | likely_pathogenic | 0.7418 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
E/G | 0.2655 | likely_benign | 0.2476 | benign | -0.248 | Destabilizing | 0.997 | D | 0.566 | neutral | N | 0.492622225 | None | None | I |
E/H | 0.547 | ambiguous | 0.5027 | ambiguous | 0.484 | Stabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | I |
E/I | 0.3705 | ambiguous | 0.3359 | benign | 0.221 | Stabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | I |
E/K | 0.1883 | likely_benign | 0.1756 | benign | 0.393 | Stabilizing | 0.37 | N | 0.33 | neutral | N | 0.456060198 | None | None | I |
E/L | 0.4184 | ambiguous | 0.3934 | ambiguous | 0.221 | Stabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | I |
E/M | 0.4979 | ambiguous | 0.4621 | ambiguous | 0.026 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
E/N | 0.3455 | ambiguous | 0.3232 | benign | 0.111 | Stabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | I |
E/P | 0.449 | ambiguous | 0.4271 | ambiguous | 0.131 | Stabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
E/Q | 0.1597 | likely_benign | 0.1479 | benign | 0.136 | Stabilizing | 0.978 | D | 0.535 | neutral | N | 0.501947203 | None | None | I |
E/R | 0.3128 | likely_benign | 0.2889 | benign | 0.655 | Stabilizing | 0.967 | D | 0.595 | neutral | None | None | None | None | I |
E/S | 0.2505 | likely_benign | 0.2296 | benign | -0.039 | Destabilizing | 0.983 | D | 0.611 | neutral | None | None | None | None | I |
E/T | 0.2887 | likely_benign | 0.2615 | benign | 0.085 | Stabilizing | 0.998 | D | 0.569 | neutral | None | None | None | None | I |
E/V | 0.2292 | likely_benign | 0.2033 | benign | 0.131 | Stabilizing | 0.997 | D | 0.601 | neutral | N | 0.510684117 | None | None | I |
E/W | 0.9269 | likely_pathogenic | 0.9129 | pathogenic | 0.027 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/Y | 0.6468 | likely_pathogenic | 0.6075 | pathogenic | 0.173 | Stabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.