Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8868 | 26827;26828;26829 | chr2:178714056;178714055;178714054 | chr2:179578783;179578782;179578781 |
N2AB | 8551 | 25876;25877;25878 | chr2:178714056;178714055;178714054 | chr2:179578783;179578782;179578781 |
N2A | 7624 | 23095;23096;23097 | chr2:178714056;178714055;178714054 | chr2:179578783;179578782;179578781 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.425 | N | 0.285 | 0.139 | 0.348101942276 | gnomAD-4.0.0 | 1.36857E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79905E-06 | 0 | 0 |
K/N | None | None | 0.002 | N | 0.207 | 0.103 | 0.0954503805726 | gnomAD-4.0.0 | 1.59185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
K/Q | rs776511625 | 0.34 | 0.642 | N | 0.33 | 0.15 | 0.239901079897 | gnomAD-2.1.1 | 4.02E-05 | None | None | None | None | N | None | 0 | 2.03524E-04 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
K/Q | rs776511625 | 0.34 | 0.642 | N | 0.33 | 0.15 | 0.239901079897 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 0 | 1.96438E-04 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/Q | rs776511625 | 0.34 | 0.642 | N | 0.33 | 0.15 | 0.239901079897 | gnomAD-4.0.0 | 2.41707E-05 | None | None | None | None | N | None | 0 | 2.3352E-04 | None | 0 | 0 | None | 0 | 0 | 1.94961E-05 | 0 | 3.20307E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2617 | likely_benign | 0.2742 | benign | -0.092 | Destabilizing | 0.495 | N | 0.371 | neutral | None | None | None | None | N |
K/C | 0.5431 | ambiguous | 0.5466 | ambiguous | -0.391 | Destabilizing | 0.995 | D | 0.309 | neutral | None | None | None | None | N |
K/D | 0.4226 | ambiguous | 0.4629 | ambiguous | 0.168 | Stabilizing | 0.543 | D | 0.341 | neutral | None | None | None | None | N |
K/E | 0.111 | likely_benign | 0.1236 | benign | 0.213 | Stabilizing | 0.425 | N | 0.285 | neutral | N | 0.476280755 | None | None | N |
K/F | 0.5459 | ambiguous | 0.572 | pathogenic | -0.136 | Destabilizing | 0.944 | D | 0.347 | neutral | None | None | None | None | N |
K/G | 0.3829 | ambiguous | 0.4196 | ambiguous | -0.336 | Destabilizing | 0.543 | D | 0.342 | neutral | None | None | None | None | N |
K/H | 0.2244 | likely_benign | 0.2343 | benign | -0.524 | Destabilizing | 0.017 | N | 0.229 | neutral | None | None | None | None | N |
K/I | 0.1854 | likely_benign | 0.1823 | benign | 0.487 | Stabilizing | 0.023 | N | 0.313 | neutral | N | 0.498909685 | None | None | N |
K/L | 0.2277 | likely_benign | 0.2329 | benign | 0.487 | Stabilizing | 0.329 | N | 0.333 | neutral | None | None | None | None | N |
K/M | 0.1408 | likely_benign | 0.1486 | benign | 0.112 | Stabilizing | 0.944 | D | 0.315 | neutral | None | None | None | None | N |
K/N | 0.2335 | likely_benign | 0.2476 | benign | -0.024 | Destabilizing | 0.002 | N | 0.207 | neutral | N | 0.477918337 | None | None | N |
K/P | 0.8978 | likely_pathogenic | 0.9213 | pathogenic | 0.323 | Stabilizing | 0.981 | D | 0.345 | neutral | None | None | None | None | N |
K/Q | 0.0959 | likely_benign | 0.1 | benign | -0.109 | Destabilizing | 0.642 | D | 0.33 | neutral | N | 0.441629463 | None | None | N |
K/R | 0.0737 | likely_benign | 0.0764 | benign | -0.155 | Destabilizing | 0.642 | D | 0.299 | neutral | N | 0.42854831 | None | None | N |
K/S | 0.2813 | likely_benign | 0.2924 | benign | -0.542 | Destabilizing | 0.329 | N | 0.282 | neutral | None | None | None | None | N |
K/T | 0.1342 | likely_benign | 0.1368 | benign | -0.329 | Destabilizing | 0.642 | D | 0.327 | neutral | N | 0.462930242 | None | None | N |
K/V | 0.1792 | likely_benign | 0.1822 | benign | 0.323 | Stabilizing | 0.031 | N | 0.249 | neutral | None | None | None | None | N |
K/W | 0.5889 | likely_pathogenic | 0.6173 | pathogenic | -0.142 | Destabilizing | 0.995 | D | 0.347 | neutral | None | None | None | None | N |
K/Y | 0.4398 | ambiguous | 0.4706 | ambiguous | 0.193 | Stabilizing | 0.893 | D | 0.345 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.