Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8870 | 26833;26834;26835 | chr2:178714050;178714049;178714048 | chr2:179578777;179578776;179578775 |
N2AB | 8553 | 25882;25883;25884 | chr2:178714050;178714049;178714048 | chr2:179578777;179578776;179578775 |
N2A | 7626 | 23101;23102;23103 | chr2:178714050;178714049;178714048 | chr2:179578777;179578776;179578775 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.015 | N | 0.353 | 0.09 | 0.267755039894 | gnomAD-4.0.0 | 1.20032E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7777 | likely_pathogenic | 0.819 | pathogenic | -2.044 | Highly Destabilizing | 0.25 | N | 0.529 | neutral | None | None | None | None | N |
L/C | 0.8063 | likely_pathogenic | 0.8467 | pathogenic | -1.18 | Destabilizing | 0.982 | D | 0.764 | deleterious | None | None | None | None | N |
L/D | 0.988 | likely_pathogenic | 0.9919 | pathogenic | -2.527 | Highly Destabilizing | 0.826 | D | 0.851 | deleterious | None | None | None | None | N |
L/E | 0.9088 | likely_pathogenic | 0.9356 | pathogenic | -2.24 | Highly Destabilizing | 0.826 | D | 0.835 | deleterious | None | None | None | None | N |
L/F | 0.348 | ambiguous | 0.4294 | ambiguous | -1.222 | Destabilizing | 0.7 | D | 0.682 | prob.neutral | None | None | None | None | N |
L/G | 0.9472 | likely_pathogenic | 0.9583 | pathogenic | -2.604 | Highly Destabilizing | 0.7 | D | 0.828 | deleterious | None | None | None | None | N |
L/H | 0.8208 | likely_pathogenic | 0.8688 | pathogenic | -2.209 | Highly Destabilizing | 0.982 | D | 0.849 | deleterious | None | None | None | None | N |
L/I | 0.0843 | likely_benign | 0.0891 | benign | -0.4 | Destabilizing | 0.015 | N | 0.353 | neutral | N | 0.472571233 | None | None | N |
L/K | 0.8132 | likely_pathogenic | 0.8476 | pathogenic | -1.462 | Destabilizing | 0.7 | D | 0.781 | deleterious | None | None | None | None | N |
L/M | 0.1655 | likely_benign | 0.1849 | benign | -0.414 | Destabilizing | 0.045 | N | 0.448 | neutral | None | None | None | None | N |
L/N | 0.9382 | likely_pathogenic | 0.9482 | pathogenic | -2.032 | Highly Destabilizing | 0.826 | D | 0.851 | deleterious | None | None | None | None | N |
L/P | 0.9542 | likely_pathogenic | 0.9667 | pathogenic | -0.933 | Destabilizing | 0.916 | D | 0.851 | deleterious | D | 0.526395788 | None | None | N |
L/Q | 0.6999 | likely_pathogenic | 0.766 | pathogenic | -1.747 | Destabilizing | 0.638 | D | 0.822 | deleterious | D | 0.539980592 | None | None | N |
L/R | 0.7198 | likely_pathogenic | 0.7731 | pathogenic | -1.533 | Destabilizing | 0.638 | D | 0.819 | deleterious | D | 0.535941668 | None | None | N |
L/S | 0.9268 | likely_pathogenic | 0.9479 | pathogenic | -2.638 | Highly Destabilizing | 0.7 | D | 0.755 | deleterious | None | None | None | None | N |
L/T | 0.7872 | likely_pathogenic | 0.8273 | pathogenic | -2.188 | Highly Destabilizing | 0.7 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/V | 0.1233 | likely_benign | 0.1402 | benign | -0.933 | Destabilizing | 0.094 | N | 0.49 | neutral | D | 0.5348332 | None | None | N |
L/W | 0.6506 | likely_pathogenic | 0.7395 | pathogenic | -1.612 | Destabilizing | 0.982 | D | 0.801 | deleterious | None | None | None | None | N |
L/Y | 0.7444 | likely_pathogenic | 0.8038 | pathogenic | -1.249 | Destabilizing | 0.826 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.