Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8874 | 26845;26846;26847 | chr2:178714038;178714037;178714036 | chr2:179578765;179578764;179578763 |
N2AB | 8557 | 25894;25895;25896 | chr2:178714038;178714037;178714036 | chr2:179578765;179578764;179578763 |
N2A | 7630 | 23113;23114;23115 | chr2:178714038;178714037;178714036 | chr2:179578765;179578764;179578763 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | None | N | 0.14 | 0.129 | 0.0716867268079 | gnomAD-4.0.0 | 6.84312E-07 | None | None | None | None | N | None | 0 | 0 | None | 3.82819E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs1222843561 | 0.441 | None | N | 0.084 | 0.105 | 0.0138822411134 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
N/S | rs1222843561 | 0.441 | None | N | 0.084 | 0.105 | 0.0138822411134 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88345E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.098 | likely_benign | 0.1186 | benign | -0.05 | Destabilizing | 0.007 | N | 0.193 | neutral | None | None | None | None | N |
N/C | 0.1655 | likely_benign | 0.1979 | benign | 0.168 | Stabilizing | 0.676 | D | 0.137 | neutral | None | None | None | None | N |
N/D | 0.0869 | likely_benign | 0.0906 | benign | 0.175 | Stabilizing | 0.012 | N | 0.191 | neutral | N | 0.412108193 | None | None | N |
N/E | 0.1634 | likely_benign | 0.1661 | benign | 0.114 | Stabilizing | 0.016 | N | 0.145 | neutral | None | None | None | None | N |
N/F | 0.3135 | likely_benign | 0.3603 | ambiguous | -0.668 | Destabilizing | 0.038 | N | 0.259 | neutral | None | None | None | None | N |
N/G | 0.1222 | likely_benign | 0.1451 | benign | -0.14 | Destabilizing | 0.016 | N | 0.153 | neutral | None | None | None | None | N |
N/H | 0.0745 | likely_benign | 0.0735 | benign | -0.144 | Destabilizing | None | N | 0.14 | neutral | N | 0.456112473 | None | None | N |
N/I | 0.1254 | likely_benign | 0.1484 | benign | 0.086 | Stabilizing | 0.055 | N | 0.243 | neutral | N | 0.504847783 | None | None | N |
N/K | 0.1177 | likely_benign | 0.1124 | benign | 0.172 | Stabilizing | None | N | 0.14 | neutral | N | 0.409550677 | None | None | N |
N/L | 0.1331 | likely_benign | 0.1513 | benign | 0.086 | Stabilizing | 0.031 | N | 0.167 | neutral | None | None | None | None | N |
N/M | 0.1944 | likely_benign | 0.2176 | benign | 0.115 | Stabilizing | 0.628 | D | 0.162 | neutral | None | None | None | None | N |
N/P | 0.2116 | likely_benign | 0.2535 | benign | 0.064 | Stabilizing | 0.072 | N | 0.274 | neutral | None | None | None | None | N |
N/Q | 0.1358 | likely_benign | 0.1332 | benign | -0.188 | Destabilizing | 0.072 | N | 0.15 | neutral | None | None | None | None | N |
N/R | 0.1255 | likely_benign | 0.1166 | benign | 0.238 | Stabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
N/S | 0.0563 | likely_benign | 0.0634 | benign | 0.009 | Stabilizing | None | N | 0.084 | neutral | N | 0.399448327 | None | None | N |
N/T | 0.0757 | likely_benign | 0.0909 | benign | 0.062 | Stabilizing | 0.012 | N | 0.179 | neutral | N | 0.438084073 | None | None | N |
N/V | 0.1285 | likely_benign | 0.1523 | benign | 0.064 | Stabilizing | 0.072 | N | 0.213 | neutral | None | None | None | None | N |
N/W | 0.4736 | ambiguous | 0.4954 | ambiguous | -0.814 | Destabilizing | 0.676 | D | 0.142 | neutral | None | None | None | None | N |
N/Y | 0.1066 | likely_benign | 0.1156 | benign | -0.474 | Destabilizing | 0.001 | N | 0.177 | neutral | N | 0.479989411 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.