Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8880 | 26863;26864;26865 | chr2:178714020;178714019;178714018 | chr2:179578747;179578746;179578745 |
N2AB | 8563 | 25912;25913;25914 | chr2:178714020;178714019;178714018 | chr2:179578747;179578746;179578745 |
N2A | 7636 | 23131;23132;23133 | chr2:178714020;178714019;178714018 | chr2:179578747;179578746;179578745 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs397517518 | None | 1.0 | N | 0.779 | 0.48 | 0.765860160457 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/C | rs397517518 | None | 1.0 | N | 0.779 | 0.48 | 0.765860160457 | gnomAD-4.0.0 | 2.54114E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39076E-05 | 0 | 1.60169E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7974 | likely_pathogenic | 0.8411 | pathogenic | -1.809 | Destabilizing | 0.992 | D | 0.689 | prob.neutral | None | None | None | None | N |
F/C | 0.4877 | ambiguous | 0.6355 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.485301163 | None | None | N |
F/D | 0.9334 | likely_pathogenic | 0.9414 | pathogenic | 0.165 | Stabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
F/E | 0.9571 | likely_pathogenic | 0.9605 | pathogenic | 0.266 | Stabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
F/G | 0.9216 | likely_pathogenic | 0.9369 | pathogenic | -2.138 | Highly Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
F/H | 0.7259 | likely_pathogenic | 0.7646 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
F/I | 0.2798 | likely_benign | 0.3426 | ambiguous | -0.841 | Destabilizing | 0.989 | D | 0.705 | prob.neutral | N | 0.504467433 | None | None | N |
F/K | 0.9486 | likely_pathogenic | 0.9585 | pathogenic | -0.886 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
F/L | 0.8583 | likely_pathogenic | 0.9006 | pathogenic | -0.841 | Destabilizing | 0.989 | D | 0.657 | neutral | N | 0.48436152 | None | None | N |
F/M | 0.6465 | likely_pathogenic | 0.7119 | pathogenic | -0.732 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
F/N | 0.7786 | likely_pathogenic | 0.8226 | pathogenic | -0.96 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
F/P | 0.9945 | likely_pathogenic | 0.9966 | pathogenic | -1.154 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
F/Q | 0.9095 | likely_pathogenic | 0.9231 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
F/R | 0.8683 | likely_pathogenic | 0.8948 | pathogenic | -0.389 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
F/S | 0.5813 | likely_pathogenic | 0.6628 | pathogenic | -1.872 | Destabilizing | 0.978 | D | 0.711 | prob.delet. | N | 0.441013388 | None | None | N |
F/T | 0.6747 | likely_pathogenic | 0.7347 | pathogenic | -1.676 | Destabilizing | 0.611 | D | 0.507 | neutral | None | None | None | None | N |
F/V | 0.2769 | likely_benign | 0.3292 | benign | -1.154 | Destabilizing | 0.989 | D | 0.714 | prob.delet. | N | 0.45586541 | None | None | N |
F/W | 0.7058 | likely_pathogenic | 0.7527 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
F/Y | 0.1999 | likely_benign | 0.2246 | benign | -0.175 | Destabilizing | 0.998 | D | 0.664 | neutral | N | 0.485996316 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.