Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8882 | 26869;26870;26871 | chr2:178714014;178714013;178714012 | chr2:179578741;179578740;179578739 |
N2AB | 8565 | 25918;25919;25920 | chr2:178714014;178714013;178714012 | chr2:179578741;179578740;179578739 |
N2A | 7638 | 23137;23138;23139 | chr2:178714014;178714013;178714012 | chr2:179578741;179578740;179578739 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1035818414 | None | 0.826 | N | 0.279 | 0.192 | 0.132336055621 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 1.09649E-03 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs1035818414 | None | 0.826 | N | 0.279 | 0.192 | 0.132336055621 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3688 | ambiguous | 0.4537 | ambiguous | -0.075 | Destabilizing | 0.863 | D | 0.305 | neutral | None | None | None | None | N |
N/C | 0.38 | ambiguous | 0.5062 | ambiguous | -0.058 | Destabilizing | 0.999 | D | 0.267 | neutral | None | None | None | None | N |
N/D | 0.1484 | likely_benign | 0.1764 | benign | 0.233 | Stabilizing | 0.704 | D | 0.271 | neutral | N | 0.421709111 | None | None | N |
N/E | 0.4268 | ambiguous | 0.4785 | ambiguous | 0.198 | Stabilizing | 0.17 | N | 0.098 | neutral | None | None | None | None | N |
N/F | 0.7163 | likely_pathogenic | 0.8072 | pathogenic | -0.709 | Destabilizing | 0.997 | D | 0.257 | neutral | None | None | None | None | N |
N/G | 0.2286 | likely_benign | 0.2698 | benign | -0.176 | Destabilizing | 0.927 | D | 0.237 | neutral | None | None | None | None | N |
N/H | 0.0857 | likely_benign | 0.1048 | benign | -0.098 | Destabilizing | 0.988 | D | 0.267 | neutral | N | 0.492187917 | None | None | N |
N/I | 0.6012 | likely_pathogenic | 0.7195 | pathogenic | 0.094 | Stabilizing | 0.996 | D | 0.297 | neutral | N | 0.46550471 | None | None | N |
N/K | 0.2884 | likely_benign | 0.3499 | ambiguous | 0.144 | Stabilizing | 0.704 | D | 0.263 | neutral | N | 0.449127786 | None | None | N |
N/L | 0.353 | ambiguous | 0.4383 | ambiguous | 0.094 | Stabilizing | 0.939 | D | 0.341 | neutral | None | None | None | None | N |
N/M | 0.5322 | ambiguous | 0.6353 | pathogenic | -0.126 | Destabilizing | 0.997 | D | 0.237 | neutral | None | None | None | None | N |
N/P | 0.742 | likely_pathogenic | 0.7933 | pathogenic | 0.061 | Stabilizing | 0.997 | D | 0.324 | neutral | None | None | None | None | N |
N/Q | 0.2555 | likely_benign | 0.294 | benign | -0.293 | Destabilizing | 0.2 | N | 0.1 | neutral | None | None | None | None | N |
N/R | 0.2694 | likely_benign | 0.3239 | benign | 0.232 | Stabilizing | 0.02 | N | 0.09 | neutral | None | None | None | None | N |
N/S | 0.0876 | likely_benign | 0.1002 | benign | -0.148 | Destabilizing | 0.826 | D | 0.279 | neutral | N | 0.505365071 | None | None | N |
N/T | 0.2989 | likely_benign | 0.3837 | ambiguous | -0.06 | Destabilizing | 0.959 | D | 0.22 | neutral | N | 0.496150942 | None | None | N |
N/V | 0.5893 | likely_pathogenic | 0.7004 | pathogenic | 0.061 | Stabilizing | 0.969 | D | 0.341 | neutral | None | None | None | None | N |
N/W | 0.7489 | likely_pathogenic | 0.8242 | pathogenic | -0.878 | Destabilizing | 0.999 | D | 0.304 | neutral | None | None | None | None | N |
N/Y | 0.2015 | likely_benign | 0.2682 | benign | -0.516 | Destabilizing | 0.996 | D | 0.272 | neutral | N | 0.454148405 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.