Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8893 | 26902;26903;26904 | chr2:178713981;178713980;178713979 | chr2:179578708;179578707;179578706 |
N2AB | 8576 | 25951;25952;25953 | chr2:178713981;178713980;178713979 | chr2:179578708;179578707;179578706 |
N2A | 7649 | 23170;23171;23172 | chr2:178713981;178713980;178713979 | chr2:179578708;179578707;179578706 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1353521188 | -0.303 | None | N | 0.275 | 0.123 | 0.364730456448 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
A/V | rs1353521188 | -0.303 | None | N | 0.275 | 0.123 | 0.364730456448 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88324E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3688 | ambiguous | 0.3648 | ambiguous | -0.899 | Destabilizing | 0.676 | D | 0.397 | neutral | None | None | None | None | N |
A/D | 0.1286 | likely_benign | 0.1342 | benign | -0.945 | Destabilizing | 0.038 | N | 0.411 | neutral | None | None | None | None | N |
A/E | 0.1247 | likely_benign | 0.125 | benign | -1.069 | Destabilizing | None | N | 0.13 | neutral | N | 0.383503879 | None | None | N |
A/F | 0.1848 | likely_benign | 0.1862 | benign | -1.262 | Destabilizing | 0.214 | N | 0.457 | neutral | None | None | None | None | N |
A/G | 0.0957 | likely_benign | 0.0878 | benign | -0.818 | Destabilizing | None | N | 0.13 | neutral | N | 0.459369862 | None | None | N |
A/H | 0.2679 | likely_benign | 0.2641 | benign | -0.881 | Destabilizing | 0.356 | N | 0.444 | neutral | None | None | None | None | N |
A/I | 0.1445 | likely_benign | 0.1611 | benign | -0.563 | Destabilizing | 0.013 | N | 0.397 | neutral | None | None | None | None | N |
A/K | 0.2216 | likely_benign | 0.2234 | benign | -0.872 | Destabilizing | 0.038 | N | 0.388 | neutral | None | None | None | None | N |
A/L | 0.0954 | likely_benign | 0.0999 | benign | -0.563 | Destabilizing | 0.038 | N | 0.381 | neutral | None | None | None | None | N |
A/M | 0.1262 | likely_benign | 0.1393 | benign | -0.363 | Destabilizing | 0.214 | N | 0.389 | neutral | None | None | None | None | N |
A/N | 0.1389 | likely_benign | 0.1358 | benign | -0.577 | Destabilizing | 0.072 | N | 0.425 | neutral | None | None | None | None | N |
A/P | 0.3944 | ambiguous | 0.4683 | ambiguous | -0.573 | Destabilizing | 0.295 | N | 0.386 | neutral | D | 0.535945134 | None | None | N |
A/Q | 0.186 | likely_benign | 0.1757 | benign | -0.891 | Destabilizing | 0.12 | N | 0.381 | neutral | None | None | None | None | N |
A/R | 0.2259 | likely_benign | 0.2236 | benign | -0.402 | Destabilizing | 0.214 | N | 0.375 | neutral | None | None | None | None | N |
A/S | 0.0672 | likely_benign | 0.0646 | benign | -0.837 | Destabilizing | 0.001 | N | 0.192 | neutral | N | 0.393414229 | None | None | N |
A/T | 0.0651 | likely_benign | 0.0684 | benign | -0.884 | Destabilizing | None | N | 0.106 | neutral | N | 0.406708813 | None | None | N |
A/V | 0.0854 | likely_benign | 0.094 | benign | -0.573 | Destabilizing | None | N | 0.275 | neutral | N | 0.448134148 | None | None | N |
A/W | 0.5331 | ambiguous | 0.5497 | ambiguous | -1.417 | Destabilizing | 0.864 | D | 0.527 | neutral | None | None | None | None | N |
A/Y | 0.2942 | likely_benign | 0.3029 | benign | -1.051 | Destabilizing | 0.356 | N | 0.463 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.