Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8898 | 26917;26918;26919 | chr2:178713966;178713965;178713964 | chr2:179578693;179578692;179578691 |
N2AB | 8581 | 25966;25967;25968 | chr2:178713966;178713965;178713964 | chr2:179578693;179578692;179578691 |
N2A | 7654 | 23185;23186;23187 | chr2:178713966;178713965;178713964 | chr2:179578693;179578692;179578691 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 1.0 | D | 0.781 | 0.686 | 0.888517683932 | gnomAD-4.0.0 | 1.36858E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79909E-06 | 0 | 0 |
G/V | None | None | 1.0 | D | 0.741 | 0.67 | 0.946445688288 | gnomAD-4.0.0 | 1.59167E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77393E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2675 | likely_benign | 0.3779 | ambiguous | -0.469 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.549627949 | None | None | N |
G/C | 0.6587 | likely_pathogenic | 0.7839 | pathogenic | -0.783 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
G/D | 0.6478 | likely_pathogenic | 0.8649 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/E | 0.8238 | likely_pathogenic | 0.9338 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.789 | deleterious | D | 0.653444832 | None | None | N |
G/F | 0.9584 | likely_pathogenic | 0.9815 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
G/H | 0.9031 | likely_pathogenic | 0.9672 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
G/I | 0.9358 | likely_pathogenic | 0.9737 | pathogenic | -0.144 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/K | 0.8945 | likely_pathogenic | 0.9641 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
G/L | 0.9025 | likely_pathogenic | 0.964 | pathogenic | -0.144 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
G/M | 0.925 | likely_pathogenic | 0.9703 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
G/N | 0.7725 | likely_pathogenic | 0.9182 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
G/P | 0.9942 | likely_pathogenic | 0.9977 | pathogenic | -0.21 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
G/Q | 0.8506 | likely_pathogenic | 0.939 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
G/R | 0.78 | likely_pathogenic | 0.9015 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.653243028 | None | None | N |
G/S | 0.2461 | likely_benign | 0.3805 | ambiguous | -0.846 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
G/T | 0.6854 | likely_pathogenic | 0.8252 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
G/V | 0.8473 | likely_pathogenic | 0.9267 | pathogenic | -0.21 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.653444832 | None | None | N |
G/W | 0.9303 | likely_pathogenic | 0.974 | pathogenic | -1.18 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.637627276 | None | None | N |
G/Y | 0.9348 | likely_pathogenic | 0.9779 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.