Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8900 | 26923;26924;26925 | chr2:178713960;178713959;178713958 | chr2:179578687;179578686;179578685 |
N2AB | 8583 | 25972;25973;25974 | chr2:178713960;178713959;178713958 | chr2:179578687;179578686;179578685 |
N2A | 7656 | 23191;23192;23193 | chr2:178713960;178713959;178713958 | chr2:179578687;179578686;179578685 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | None | None | 1.0 | D | 0.893 | 0.838 | 0.924701767363 | gnomAD-4.0.0 | 8.41302E-06 | None | None | None | None | N | None | 6.34437E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.88469E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9882 | likely_pathogenic | 0.9916 | pathogenic | -2.403 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
Y/C | 0.7621 | likely_pathogenic | 0.8366 | pathogenic | -1.794 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.659227512 | None | None | N |
Y/D | 0.9962 | likely_pathogenic | 0.9971 | pathogenic | -2.94 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.659227512 | None | None | N |
Y/E | 0.9981 | likely_pathogenic | 0.9985 | pathogenic | -2.69 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Y/F | 0.1116 | likely_benign | 0.1493 | benign | -0.822 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | D | 0.588751257 | None | None | N |
Y/G | 0.9855 | likely_pathogenic | 0.9894 | pathogenic | -2.866 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Y/H | 0.9312 | likely_pathogenic | 0.9526 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.643006347 | None | None | N |
Y/I | 0.7339 | likely_pathogenic | 0.7954 | pathogenic | -0.87 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/K | 0.9978 | likely_pathogenic | 0.9981 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/L | 0.6942 | likely_pathogenic | 0.7406 | pathogenic | -0.87 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
Y/M | 0.9335 | likely_pathogenic | 0.9561 | pathogenic | -0.97 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Y/N | 0.9727 | likely_pathogenic | 0.9798 | pathogenic | -2.866 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.659227512 | None | None | N |
Y/P | 0.9962 | likely_pathogenic | 0.9971 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
Y/Q | 0.996 | likely_pathogenic | 0.9972 | pathogenic | -2.426 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/R | 0.9891 | likely_pathogenic | 0.9906 | pathogenic | -2.166 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Y/S | 0.9708 | likely_pathogenic | 0.9784 | pathogenic | -3.225 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | D | 0.659227512 | None | None | N |
Y/T | 0.9851 | likely_pathogenic | 0.9895 | pathogenic | -2.824 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Y/V | 0.712 | likely_pathogenic | 0.7747 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
Y/W | 0.6594 | likely_pathogenic | 0.7311 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.