Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8904 | 26935;26936;26937 | chr2:178713948;178713947;178713946 | chr2:179578675;179578674;179578673 |
N2AB | 8587 | 25984;25985;25986 | chr2:178713948;178713947;178713946 | chr2:179578675;179578674;179578673 |
N2A | 7660 | 23203;23204;23205 | chr2:178713948;178713947;178713946 | chr2:179578675;179578674;179578673 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.948 | N | 0.538 | 0.373 | 0.544738774389 | gnomAD-4.0.0 | 6.84283E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99544E-07 | 0 | 0 |
V/M | None | None | 0.998 | N | 0.773 | 0.484 | 0.612591404863 | gnomAD-4.0.0 | 2.05285E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69863E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5505 | ambiguous | 0.5994 | pathogenic | -2.329 | Highly Destabilizing | 0.994 | D | 0.608 | neutral | N | 0.388653409 | None | None | N |
V/C | 0.9534 | likely_pathogenic | 0.9602 | pathogenic | -2.282 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/D | 0.9933 | likely_pathogenic | 0.9923 | pathogenic | -3.293 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/E | 0.9822 | likely_pathogenic | 0.9799 | pathogenic | -3.073 | Highly Destabilizing | 0.999 | D | 0.874 | deleterious | D | 0.538206166 | None | None | N |
V/F | 0.8363 | likely_pathogenic | 0.829 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
V/G | 0.7423 | likely_pathogenic | 0.7623 | pathogenic | -2.825 | Highly Destabilizing | 0.999 | D | 0.868 | deleterious | N | 0.496971226 | None | None | N |
V/H | 0.9967 | likely_pathogenic | 0.9965 | pathogenic | -2.388 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/I | 0.1071 | likely_benign | 0.1037 | benign | -0.929 | Destabilizing | 0.611 | D | 0.235 | neutral | None | None | None | None | N |
V/K | 0.9909 | likely_pathogenic | 0.9895 | pathogenic | -1.843 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/L | 0.6068 | likely_pathogenic | 0.6109 | pathogenic | -0.929 | Destabilizing | 0.948 | D | 0.538 | neutral | N | 0.493235017 | None | None | N |
V/M | 0.6185 | likely_pathogenic | 0.6376 | pathogenic | -1.372 | Destabilizing | 0.998 | D | 0.773 | deleterious | N | 0.515075481 | None | None | N |
V/N | 0.9767 | likely_pathogenic | 0.9767 | pathogenic | -2.283 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
V/P | 0.9952 | likely_pathogenic | 0.9953 | pathogenic | -1.373 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
V/Q | 0.9845 | likely_pathogenic | 0.9836 | pathogenic | -2.13 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/R | 0.9828 | likely_pathogenic | 0.9796 | pathogenic | -1.666 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
V/S | 0.8638 | likely_pathogenic | 0.8793 | pathogenic | -2.823 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/T | 0.7619 | likely_pathogenic | 0.7786 | pathogenic | -2.472 | Highly Destabilizing | 0.996 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/W | 0.9972 | likely_pathogenic | 0.9976 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/Y | 0.9836 | likely_pathogenic | 0.9813 | pathogenic | -1.434 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.