Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8905 | 26938;26939;26940 | chr2:178713945;178713944;178713943 | chr2:179578672;179578671;179578670 |
N2AB | 8588 | 25987;25988;25989 | chr2:178713945;178713944;178713943 | chr2:179578672;179578671;179578670 |
N2A | 7661 | 23206;23207;23208 | chr2:178713945;178713944;178713943 | chr2:179578672;179578671;179578670 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.113 | N | 0.557 | 0.201 | 0.443695250439 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1803 | likely_benign | 0.1689 | benign | -0.355 | Destabilizing | 0.329 | N | 0.44 | neutral | None | None | None | None | N |
Q/C | 0.4056 | ambiguous | 0.4629 | ambiguous | 0.049 | Stabilizing | 0.995 | D | 0.577 | neutral | None | None | None | None | N |
Q/D | 0.3343 | likely_benign | 0.3207 | benign | -1.053 | Destabilizing | 0.704 | D | 0.298 | neutral | None | None | None | None | N |
Q/E | 0.0763 | likely_benign | 0.0757 | benign | -0.979 | Destabilizing | 0.27 | N | 0.372 | neutral | N | 0.39947341 | None | None | N |
Q/F | 0.496 | ambiguous | 0.505 | ambiguous | -0.291 | Destabilizing | 0.893 | D | 0.609 | neutral | None | None | None | None | N |
Q/G | 0.2148 | likely_benign | 0.2058 | benign | -0.679 | Destabilizing | 0.495 | N | 0.539 | neutral | None | None | None | None | N |
Q/H | 0.1463 | likely_benign | 0.1605 | benign | -0.814 | Destabilizing | 0.975 | D | 0.492 | neutral | N | 0.489807412 | None | None | N |
Q/I | 0.2645 | likely_benign | 0.2673 | benign | 0.453 | Stabilizing | 0.543 | D | 0.623 | neutral | None | None | None | None | N |
Q/K | 0.0817 | likely_benign | 0.0776 | benign | -0.201 | Destabilizing | 0.002 | N | 0.101 | neutral | N | 0.432700549 | None | None | N |
Q/L | 0.1054 | likely_benign | 0.1135 | benign | 0.453 | Stabilizing | 0.113 | N | 0.557 | neutral | N | 0.496405311 | None | None | N |
Q/M | 0.2679 | likely_benign | 0.2568 | benign | 0.955 | Stabilizing | 0.085 | N | 0.121 | neutral | None | None | None | None | N |
Q/N | 0.2426 | likely_benign | 0.2311 | benign | -0.748 | Destabilizing | 0.704 | D | 0.332 | neutral | None | None | None | None | N |
Q/P | 0.6803 | likely_pathogenic | 0.6965 | pathogenic | 0.215 | Stabilizing | 0.784 | D | 0.504 | neutral | D | 0.527421651 | None | None | N |
Q/R | 0.0852 | likely_benign | 0.0874 | benign | -0.152 | Destabilizing | 0.473 | N | 0.299 | neutral | N | 0.43749308 | None | None | N |
Q/S | 0.1874 | likely_benign | 0.165 | benign | -0.759 | Destabilizing | 0.037 | N | 0.111 | neutral | None | None | None | None | N |
Q/T | 0.1381 | likely_benign | 0.1224 | benign | -0.509 | Destabilizing | 0.329 | N | 0.452 | neutral | None | None | None | None | N |
Q/V | 0.1787 | likely_benign | 0.1799 | benign | 0.215 | Stabilizing | 0.329 | N | 0.545 | neutral | None | None | None | None | N |
Q/W | 0.3346 | likely_benign | 0.3584 | ambiguous | -0.26 | Destabilizing | 0.995 | D | 0.557 | neutral | None | None | None | None | N |
Q/Y | 0.3139 | likely_benign | 0.3393 | benign | 0.055 | Stabilizing | 0.944 | D | 0.516 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.