Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8913 | 26962;26963;26964 | chr2:178713921;178713920;178713919 | chr2:179578648;179578647;179578646 |
N2AB | 8596 | 26011;26012;26013 | chr2:178713921;178713920;178713919 | chr2:179578648;179578647;179578646 |
N2A | 7669 | 23230;23231;23232 | chr2:178713921;178713920;178713919 | chr2:179578648;179578647;179578646 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | rs775565721 | -2.599 | 0.92 | D | 0.726 | 0.34 | 0.819116995716 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.63655E-04 | None | 0 | 0 | 0 |
C/G | rs775565721 | -2.599 | 0.92 | D | 0.726 | 0.34 | 0.819116995716 | gnomAD-4.0.0 | 6.84347E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 9.27967E-05 | 3.31356E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4225 | ambiguous | 0.4568 | ambiguous | -1.916 | Destabilizing | 0.579 | D | 0.505 | neutral | None | None | None | None | N |
C/D | 0.7608 | likely_pathogenic | 0.8149 | pathogenic | -0.451 | Destabilizing | 0.939 | D | 0.783 | deleterious | None | None | None | None | N |
C/E | 0.8994 | likely_pathogenic | 0.92 | pathogenic | -0.33 | Destabilizing | 0.939 | D | 0.786 | deleterious | None | None | None | None | N |
C/F | 0.3312 | likely_benign | 0.3562 | ambiguous | -1.2 | Destabilizing | 0.996 | D | 0.771 | deleterious | N | 0.497480389 | None | None | N |
C/G | 0.2245 | likely_benign | 0.262 | benign | -2.244 | Highly Destabilizing | 0.92 | D | 0.726 | prob.delet. | D | 0.529325806 | None | None | N |
C/H | 0.7247 | likely_pathogenic | 0.7649 | pathogenic | -2.156 | Highly Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
C/I | 0.5707 | likely_pathogenic | 0.6344 | pathogenic | -1.063 | Destabilizing | 0.969 | D | 0.768 | deleterious | None | None | None | None | N |
C/K | 0.8961 | likely_pathogenic | 0.919 | pathogenic | -1.089 | Destabilizing | 0.939 | D | 0.781 | deleterious | None | None | None | None | N |
C/L | 0.5852 | likely_pathogenic | 0.6183 | pathogenic | -1.063 | Destabilizing | 0.969 | D | 0.691 | prob.neutral | None | None | None | None | N |
C/M | 0.7381 | likely_pathogenic | 0.7624 | pathogenic | -0.007 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | None | None | None | None | N |
C/N | 0.6902 | likely_pathogenic | 0.751 | pathogenic | -1.126 | Destabilizing | 0.939 | D | 0.789 | deleterious | None | None | None | None | N |
C/P | 0.9929 | likely_pathogenic | 0.994 | pathogenic | -1.322 | Destabilizing | 0.991 | D | 0.788 | deleterious | None | None | None | None | N |
C/Q | 0.7767 | likely_pathogenic | 0.8004 | pathogenic | -0.985 | Destabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | N |
C/R | 0.5888 | likely_pathogenic | 0.6438 | pathogenic | -0.973 | Destabilizing | 0.988 | D | 0.786 | deleterious | N | 0.51021997 | None | None | N |
C/S | 0.2561 | likely_benign | 0.2973 | benign | -1.7 | Destabilizing | 0.159 | N | 0.393 | neutral | N | 0.456134769 | None | None | N |
C/T | 0.4132 | ambiguous | 0.4665 | ambiguous | -1.386 | Destabilizing | 0.759 | D | 0.685 | prob.neutral | None | None | None | None | N |
C/V | 0.4607 | ambiguous | 0.5255 | ambiguous | -1.322 | Destabilizing | 0.969 | D | 0.709 | prob.delet. | None | None | None | None | N |
C/W | 0.7667 | likely_pathogenic | 0.8 | pathogenic | -1.176 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.498240857 | None | None | N |
C/Y | 0.5384 | ambiguous | 0.5974 | pathogenic | -1.191 | Destabilizing | 0.996 | D | 0.764 | deleterious | N | 0.484731732 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.