Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8914 | 26965;26966;26967 | chr2:178713918;178713917;178713916 | chr2:179578645;179578644;179578643 |
N2AB | 8597 | 26014;26015;26016 | chr2:178713918;178713917;178713916 | chr2:179578645;179578644;179578643 |
N2A | 7670 | 23233;23234;23235 | chr2:178713918;178713917;178713916 | chr2:179578645;179578644;179578643 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1387091014 | -0.612 | 0.055 | N | 0.547 | 0.147 | 0.222439326576 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1387091014 | -0.612 | 0.055 | N | 0.547 | 0.147 | 0.222439326576 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs1387091014 | -0.612 | 0.055 | N | 0.547 | 0.147 | 0.222439326576 | gnomAD-4.0.0 | 2.56299E-06 | None | None | None | None | N | None | 0 | 3.39109E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0904 | likely_benign | 0.098 | benign | -0.499 | Destabilizing | 0.055 | N | 0.547 | neutral | N | 0.49492523 | None | None | N |
T/C | 0.4359 | ambiguous | 0.4733 | ambiguous | -0.223 | Destabilizing | 0.968 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/D | 0.3185 | likely_benign | 0.3657 | ambiguous | 0.001 | Stabilizing | 0.272 | N | 0.69 | prob.neutral | None | None | None | None | N |
T/E | 0.2083 | likely_benign | 0.2166 | benign | -0.068 | Destabilizing | 0.157 | N | 0.635 | neutral | None | None | None | None | N |
T/F | 0.1516 | likely_benign | 0.1813 | benign | -0.917 | Destabilizing | 0.89 | D | 0.795 | deleterious | None | None | None | None | N |
T/G | 0.2565 | likely_benign | 0.2821 | benign | -0.655 | Destabilizing | 0.272 | N | 0.732 | prob.delet. | None | None | None | None | N |
T/H | 0.1844 | likely_benign | 0.1959 | benign | -1.011 | Destabilizing | 0.909 | D | 0.781 | deleterious | None | None | None | None | N |
T/I | 0.1344 | likely_benign | 0.1469 | benign | -0.2 | Destabilizing | 0.667 | D | 0.735 | prob.delet. | N | 0.518052806 | None | None | N |
T/K | 0.125 | likely_benign | 0.1159 | benign | -0.472 | Destabilizing | None | N | 0.359 | neutral | N | 0.496519954 | None | None | N |
T/L | 0.0907 | likely_benign | 0.0952 | benign | -0.2 | Destabilizing | 0.272 | N | 0.633 | neutral | None | None | None | None | N |
T/M | 0.0847 | likely_benign | 0.0886 | benign | 0.102 | Stabilizing | 0.968 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/N | 0.1231 | likely_benign | 0.1414 | benign | -0.203 | Destabilizing | 0.272 | N | 0.559 | neutral | None | None | None | None | N |
T/P | 0.1827 | likely_benign | 0.2102 | benign | -0.27 | Destabilizing | 0.667 | D | 0.706 | prob.neutral | D | 0.524325418 | None | None | N |
T/Q | 0.1596 | likely_benign | 0.1502 | benign | -0.465 | Destabilizing | 0.396 | N | 0.711 | prob.delet. | None | None | None | None | N |
T/R | 0.0996 | likely_benign | 0.0995 | benign | -0.187 | Destabilizing | 0.124 | N | 0.673 | neutral | D | 0.525536139 | None | None | N |
T/S | 0.0908 | likely_benign | 0.1014 | benign | -0.42 | Destabilizing | 0.055 | N | 0.542 | neutral | N | 0.445053771 | None | None | N |
T/V | 0.1167 | likely_benign | 0.1232 | benign | -0.27 | Destabilizing | 0.272 | N | 0.533 | neutral | None | None | None | None | N |
T/W | 0.4707 | ambiguous | 0.5055 | ambiguous | -0.887 | Destabilizing | 0.968 | D | 0.778 | deleterious | None | None | None | None | N |
T/Y | 0.2072 | likely_benign | 0.2368 | benign | -0.627 | Destabilizing | 0.89 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.