Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8918 | 26977;26978;26979 | chr2:178713906;178713905;178713904 | chr2:179578633;179578632;179578631 |
N2AB | 8601 | 26026;26027;26028 | chr2:178713906;178713905;178713904 | chr2:179578633;179578632;179578631 |
N2A | 7674 | 23245;23246;23247 | chr2:178713906;178713905;178713904 | chr2:179578633;179578632;179578631 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.002 | N | 0.038 | 0.148 | 0.166414681773 | gnomAD-4.0.0 | 3.4231E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.4996E-06 | 0 | 0 |
Q/R | rs760040495 | 0.337 | 0.061 | N | 0.213 | 0.113 | 0.158396225186 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11445E-04 | None | 0 | None | 0 | 0 | 0 |
Q/R | rs760040495 | 0.337 | 0.061 | N | 0.213 | 0.113 | 0.158396225186 | gnomAD-4.0.0 | 3.42336E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.56201E-05 | None | 0 | 0 | 1.79993E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1604 | likely_benign | 0.1842 | benign | -0.558 | Destabilizing | 0.001 | N | 0.099 | neutral | None | None | None | None | N |
Q/C | 0.3743 | ambiguous | 0.4638 | ambiguous | 0.056 | Stabilizing | 0.901 | D | 0.403 | neutral | None | None | None | None | N |
Q/D | 0.1744 | likely_benign | 0.1953 | benign | 0.043 | Stabilizing | 0.001 | N | 0.042 | neutral | None | None | None | None | N |
Q/E | 0.0662 | likely_benign | 0.0661 | benign | 0.063 | Stabilizing | 0.028 | N | 0.19 | neutral | N | 0.454636046 | None | None | N |
Q/F | 0.336 | likely_benign | 0.3981 | ambiguous | -0.574 | Destabilizing | 0.296 | N | 0.487 | neutral | None | None | None | None | N |
Q/G | 0.2076 | likely_benign | 0.265 | benign | -0.812 | Destabilizing | 0.036 | N | 0.309 | neutral | None | None | None | None | N |
Q/H | 0.088 | likely_benign | 0.1083 | benign | -0.763 | Destabilizing | None | N | 0.041 | neutral | N | 0.449539657 | None | None | N |
Q/I | 0.2055 | likely_benign | 0.2234 | benign | 0.045 | Stabilizing | 0.296 | N | 0.497 | neutral | None | None | None | None | N |
Q/K | 0.0801 | likely_benign | 0.085 | benign | 0.008 | Stabilizing | 0.002 | N | 0.038 | neutral | N | 0.448555436 | None | None | N |
Q/L | 0.0802 | likely_benign | 0.0913 | benign | 0.045 | Stabilizing | 0.116 | N | 0.343 | neutral | N | 0.446499352 | None | None | N |
Q/M | 0.2657 | likely_benign | 0.2767 | benign | 0.476 | Stabilizing | 0.901 | D | 0.265 | neutral | None | None | None | None | N |
Q/N | 0.1572 | likely_benign | 0.1831 | benign | -0.415 | Destabilizing | 0.08 | N | 0.211 | neutral | None | None | None | None | N |
Q/P | 0.2624 | likely_benign | 0.4106 | ambiguous | -0.127 | Destabilizing | 0.391 | N | 0.356 | neutral | N | 0.487266627 | None | None | N |
Q/R | 0.0782 | likely_benign | 0.088 | benign | 0.078 | Stabilizing | 0.061 | N | 0.213 | neutral | N | 0.442728328 | None | None | N |
Q/S | 0.1644 | likely_benign | 0.1876 | benign | -0.51 | Destabilizing | 0.036 | N | 0.168 | neutral | None | None | None | None | N |
Q/T | 0.1308 | likely_benign | 0.136 | benign | -0.306 | Destabilizing | 0.001 | N | 0.126 | neutral | None | None | None | None | N |
Q/V | 0.1496 | likely_benign | 0.1616 | benign | -0.127 | Destabilizing | 0.148 | N | 0.343 | neutral | None | None | None | None | N |
Q/W | 0.2396 | likely_benign | 0.2891 | benign | -0.425 | Destabilizing | 0.972 | D | 0.377 | neutral | None | None | None | None | N |
Q/Y | 0.1952 | likely_benign | 0.248 | benign | -0.203 | Destabilizing | 0.174 | N | 0.388 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.