Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8931 | 27016;27017;27018 | chr2:178713343;178713342;178713341 | chr2:179578070;179578069;179578068 |
N2AB | 8614 | 26065;26066;26067 | chr2:178713343;178713342;178713341 | chr2:179578070;179578069;179578068 |
N2A | 7687 | 23284;23285;23286 | chr2:178713343;178713342;178713341 | chr2:179578070;179578069;179578068 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs759670367 | 0.688 | 0.001 | N | 0.399 | 0.164 | 0.471539375507 | gnomAD-2.1.1 | 5.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.49E-05 | 0 |
K/I | rs759670367 | 0.688 | 0.001 | N | 0.399 | 0.164 | 0.471539375507 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/I | rs759670367 | 0.688 | 0.001 | N | 0.399 | 0.164 | 0.471539375507 | gnomAD-4.0.0 | 3.85826E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.2282E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3971 | ambiguous | 0.4878 | ambiguous | -0.424 | Destabilizing | 0.035 | N | 0.498 | neutral | None | None | None | None | N |
K/C | 0.7048 | likely_pathogenic | 0.7529 | pathogenic | -0.482 | Destabilizing | 0.935 | D | 0.612 | neutral | None | None | None | None | N |
K/D | 0.6687 | likely_pathogenic | 0.7521 | pathogenic | 0.286 | Stabilizing | 0.38 | N | 0.527 | neutral | None | None | None | None | N |
K/E | 0.245 | likely_benign | 0.3199 | benign | 0.381 | Stabilizing | 0.062 | N | 0.517 | neutral | N | 0.491866283 | None | None | N |
K/F | 0.6885 | likely_pathogenic | 0.7778 | pathogenic | -0.189 | Destabilizing | 0.38 | N | 0.611 | neutral | None | None | None | None | N |
K/G | 0.4414 | ambiguous | 0.5158 | ambiguous | -0.748 | Destabilizing | 0.149 | N | 0.555 | neutral | None | None | None | None | N |
K/H | 0.3044 | likely_benign | 0.3583 | ambiguous | -0.917 | Destabilizing | 0.824 | D | 0.561 | neutral | None | None | None | None | N |
K/I | 0.3456 | ambiguous | 0.4442 | ambiguous | 0.393 | Stabilizing | 0.001 | N | 0.399 | neutral | N | 0.494695685 | None | None | N |
K/L | 0.3332 | likely_benign | 0.4121 | ambiguous | 0.393 | Stabilizing | 0.029 | N | 0.52 | neutral | None | None | None | None | N |
K/M | 0.2314 | likely_benign | 0.2882 | benign | 0.107 | Stabilizing | 0.38 | N | 0.56 | neutral | None | None | None | None | N |
K/N | 0.4454 | ambiguous | 0.5433 | ambiguous | -0.151 | Destabilizing | 0.117 | N | 0.51 | neutral | N | 0.48922841 | None | None | N |
K/P | 0.4754 | ambiguous | 0.5619 | ambiguous | 0.151 | Stabilizing | 0.555 | D | 0.573 | neutral | None | None | None | None | N |
K/Q | 0.1432 | likely_benign | 0.1685 | benign | -0.206 | Destabilizing | 0.317 | N | 0.551 | neutral | N | 0.496080024 | None | None | N |
K/R | 0.0774 | likely_benign | 0.0787 | benign | -0.28 | Destabilizing | None | N | 0.163 | neutral | N | 0.515820578 | None | None | N |
K/S | 0.4685 | ambiguous | 0.568 | pathogenic | -0.821 | Destabilizing | 0.007 | N | 0.223 | neutral | None | None | None | None | N |
K/T | 0.2357 | likely_benign | 0.3079 | benign | -0.525 | Destabilizing | 0.062 | N | 0.533 | neutral | N | 0.521746472 | None | None | N |
K/V | 0.351 | ambiguous | 0.4352 | ambiguous | 0.151 | Stabilizing | 0.029 | N | 0.531 | neutral | None | None | None | None | N |
K/W | 0.6472 | likely_pathogenic | 0.7139 | pathogenic | -0.078 | Destabilizing | 0.935 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/Y | 0.5355 | ambiguous | 0.6165 | pathogenic | 0.209 | Stabilizing | 0.555 | D | 0.61 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.