Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8932 | 27019;27020;27021 | chr2:178713340;178713339;178713338 | chr2:179578067;179578066;179578065 |
N2AB | 8615 | 26068;26069;26070 | chr2:178713340;178713339;178713338 | chr2:179578067;179578066;179578065 |
N2A | 7688 | 23287;23288;23289 | chr2:178713340;178713339;178713338 | chr2:179578067;179578066;179578065 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.748 | 0.385 | 0.50143340055 | gnomAD-4.0.0 | 3.50549E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.14062E-06 | 0 | 3.23562E-05 |
L/S | rs2154296552 | None | 1.0 | N | 0.866 | 0.476 | 0.748157190483 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07727E-04 | 0 |
L/S | rs2154296552 | None | 1.0 | N | 0.866 | 0.476 | 0.748157190483 | gnomAD-4.0.0 | 6.58016E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.079E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8915 | likely_pathogenic | 0.9328 | pathogenic | -2.177 | Highly Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/C | 0.9309 | likely_pathogenic | 0.9594 | pathogenic | -1.374 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
L/D | 0.9968 | likely_pathogenic | 0.9981 | pathogenic | -2.015 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.9782 | likely_pathogenic | 0.9856 | pathogenic | -1.957 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/F | 0.6617 | likely_pathogenic | 0.77 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.748 | deleterious | N | 0.47689115 | None | None | N |
L/G | 0.9695 | likely_pathogenic | 0.98 | pathogenic | -2.579 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/H | 0.9649 | likely_pathogenic | 0.9824 | pathogenic | -1.874 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/I | 0.2519 | likely_benign | 0.3139 | benign | -1.093 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
L/K | 0.9631 | likely_pathogenic | 0.9761 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/M | 0.2841 | likely_benign | 0.3264 | benign | -0.811 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.462002899 | None | None | N |
L/N | 0.9796 | likely_pathogenic | 0.986 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/P | 0.6327 | likely_pathogenic | 0.7953 | pathogenic | -1.428 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/Q | 0.9089 | likely_pathogenic | 0.9424 | pathogenic | -1.527 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/R | 0.9315 | likely_pathogenic | 0.961 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/S | 0.9778 | likely_pathogenic | 0.9883 | pathogenic | -2.042 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | N | 0.478625897 | None | None | N |
L/T | 0.9318 | likely_pathogenic | 0.9592 | pathogenic | -1.862 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
L/V | 0.3324 | likely_benign | 0.4251 | ambiguous | -1.428 | Destabilizing | 0.999 | D | 0.54 | neutral | N | 0.487740476 | None | None | N |
L/W | 0.8778 | likely_pathogenic | 0.9317 | pathogenic | -1.711 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.518975463 | None | None | N |
L/Y | 0.951 | likely_pathogenic | 0.9727 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.