Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8935 | 27028;27029;27030 | chr2:178713331;178713330;178713329 | chr2:179578058;179578057;179578056 |
N2AB | 8618 | 26077;26078;26079 | chr2:178713331;178713330;178713329 | chr2:179578058;179578057;179578056 |
N2A | 7691 | 23296;23297;23298 | chr2:178713331;178713330;178713329 | chr2:179578058;179578057;179578056 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs571245328 | -0.32 | 0.171 | N | 0.421 | 0.242 | 0.31411915649 | gnomAD-2.1.1 | 1.93E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.57E-05 | 0 |
T/R | rs571245328 | -0.32 | 0.171 | N | 0.421 | 0.242 | 0.31411915649 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
T/R | rs571245328 | -0.32 | 0.171 | N | 0.421 | 0.242 | 0.31411915649 | gnomAD-4.0.0 | 9.59104E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.30161E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0736 | likely_benign | 0.0813 | benign | -0.827 | Destabilizing | None | N | 0.073 | neutral | N | 0.489689982 | None | None | N |
T/C | 0.3352 | likely_benign | 0.3567 | ambiguous | -0.489 | Destabilizing | 0.001 | N | 0.23 | neutral | None | None | None | None | N |
T/D | 0.3397 | likely_benign | 0.4459 | ambiguous | -0.658 | Destabilizing | 0.072 | N | 0.418 | neutral | None | None | None | None | N |
T/E | 0.2438 | likely_benign | 0.3164 | benign | -0.648 | Destabilizing | 0.072 | N | 0.426 | neutral | None | None | None | None | N |
T/F | 0.1698 | likely_benign | 0.2127 | benign | -0.847 | Destabilizing | 0.214 | N | 0.413 | neutral | None | None | None | None | N |
T/G | 0.2089 | likely_benign | 0.2354 | benign | -1.106 | Destabilizing | None | N | 0.235 | neutral | None | None | None | None | N |
T/H | 0.2397 | likely_benign | 0.2842 | benign | -1.451 | Destabilizing | 0.864 | D | 0.373 | neutral | None | None | None | None | N |
T/I | 0.0932 | likely_benign | 0.1153 | benign | -0.169 | Destabilizing | 0.029 | N | 0.424 | neutral | N | 0.433777984 | None | None | N |
T/K | 0.167 | likely_benign | 0.2108 | benign | -0.909 | Destabilizing | 0.055 | N | 0.391 | neutral | N | 0.487036466 | None | None | N |
T/L | 0.0894 | likely_benign | 0.1022 | benign | -0.169 | Destabilizing | 0.006 | N | 0.358 | neutral | None | None | None | None | N |
T/M | 0.0679 | likely_benign | 0.0733 | benign | 0.187 | Stabilizing | 0.007 | N | 0.305 | neutral | None | None | None | None | N |
T/N | 0.1075 | likely_benign | 0.1368 | benign | -0.873 | Destabilizing | 0.136 | N | 0.347 | neutral | None | None | None | None | N |
T/P | 0.2733 | likely_benign | 0.3386 | benign | -0.356 | Destabilizing | 0.171 | N | 0.424 | neutral | D | 0.530384598 | None | None | N |
T/Q | 0.1884 | likely_benign | 0.2204 | benign | -1.033 | Destabilizing | 0.356 | N | 0.406 | neutral | None | None | None | None | N |
T/R | 0.1334 | likely_benign | 0.1633 | benign | -0.677 | Destabilizing | 0.171 | N | 0.421 | neutral | N | 0.495829308 | None | None | N |
T/S | 0.1051 | likely_benign | 0.1231 | benign | -1.079 | Destabilizing | 0.012 | N | 0.334 | neutral | N | 0.517839376 | None | None | N |
T/V | 0.0882 | likely_benign | 0.0967 | benign | -0.356 | Destabilizing | 0.016 | N | 0.284 | neutral | None | None | None | None | N |
T/W | 0.4328 | ambiguous | 0.4812 | ambiguous | -0.814 | Destabilizing | 0.864 | D | 0.397 | neutral | None | None | None | None | N |
T/Y | 0.2015 | likely_benign | 0.2329 | benign | -0.584 | Destabilizing | 0.356 | N | 0.411 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.