Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8942 | 27049;27050;27051 | chr2:178713310;178713309;178713308 | chr2:179578037;179578036;179578035 |
N2AB | 8625 | 26098;26099;26100 | chr2:178713310;178713309;178713308 | chr2:179578037;179578036;179578035 |
N2A | 7698 | 23317;23318;23319 | chr2:178713310;178713309;178713308 | chr2:179578037;179578036;179578035 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.006 | N | 0.285 | 0.265 | 0.430579932962 | gnomAD-4.0.0 | 6.95618E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.10152E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0807 | likely_benign | 0.0877 | benign | -0.578 | Destabilizing | 0.01 | N | 0.118 | neutral | N | 0.446532985 | None | None | N |
S/C | 0.1695 | likely_benign | 0.1859 | benign | -0.376 | Destabilizing | 0.017 | N | 0.271 | neutral | None | None | None | None | N |
S/D | 0.4859 | ambiguous | 0.5008 | ambiguous | 0.022 | Stabilizing | 0.704 | D | 0.237 | neutral | None | None | None | None | N |
S/E | 0.6379 | likely_pathogenic | 0.6249 | pathogenic | -0.048 | Destabilizing | 0.704 | D | 0.236 | neutral | None | None | None | None | N |
S/F | 0.2348 | likely_benign | 0.2412 | benign | -1.057 | Destabilizing | 0.893 | D | 0.447 | neutral | None | None | None | None | N |
S/G | 0.1328 | likely_benign | 0.136 | benign | -0.732 | Destabilizing | 0.495 | N | 0.265 | neutral | None | None | None | None | N |
S/H | 0.428 | ambiguous | 0.4067 | ambiguous | -1.247 | Destabilizing | 0.981 | D | 0.403 | neutral | None | None | None | None | N |
S/I | 0.2647 | likely_benign | 0.2791 | benign | -0.296 | Destabilizing | 0.543 | D | 0.397 | neutral | None | None | None | None | N |
S/K | 0.7538 | likely_pathogenic | 0.7408 | pathogenic | -0.562 | Destabilizing | 0.031 | N | 0.15 | neutral | None | None | None | None | N |
S/L | 0.1212 | likely_benign | 0.1349 | benign | -0.296 | Destabilizing | 0.006 | N | 0.285 | neutral | N | 0.493748142 | None | None | N |
S/M | 0.2517 | likely_benign | 0.2568 | benign | 0.074 | Stabilizing | 0.893 | D | 0.412 | neutral | None | None | None | None | N |
S/N | 0.1921 | likely_benign | 0.2032 | benign | -0.363 | Destabilizing | 0.704 | D | 0.312 | neutral | None | None | None | None | N |
S/P | 0.1849 | likely_benign | 0.1944 | benign | -0.36 | Destabilizing | 0.927 | D | 0.446 | neutral | N | 0.410476184 | None | None | N |
S/Q | 0.5906 | likely_pathogenic | 0.5793 | pathogenic | -0.631 | Destabilizing | 0.893 | D | 0.376 | neutral | None | None | None | None | N |
S/R | 0.6514 | likely_pathogenic | 0.6333 | pathogenic | -0.349 | Destabilizing | 0.543 | D | 0.423 | neutral | None | None | None | None | N |
S/T | 0.0947 | likely_benign | 0.0957 | benign | -0.474 | Destabilizing | 0.023 | N | 0.118 | neutral | N | 0.428483155 | None | None | N |
S/V | 0.2178 | likely_benign | 0.2323 | benign | -0.36 | Destabilizing | 0.329 | N | 0.393 | neutral | None | None | None | None | N |
S/W | 0.4035 | ambiguous | 0.3958 | ambiguous | -1.007 | Destabilizing | 0.995 | D | 0.477 | neutral | None | None | None | None | N |
S/Y | 0.2307 | likely_benign | 0.232 | benign | -0.75 | Destabilizing | 0.981 | D | 0.45 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.