Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8949 | 27070;27071;27072 | chr2:178713289;178713288;178713287 | chr2:179578016;179578015;179578014 |
N2AB | 8632 | 26119;26120;26121 | chr2:178713289;178713288;178713287 | chr2:179578016;179578015;179578014 |
N2A | 7705 | 23338;23339;23340 | chr2:178713289;178713288;178713287 | chr2:179578016;179578015;179578014 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs781692388 | -0.509 | 0.071 | D | 0.315 | 0.33 | None | gnomAD-2.1.1 | 1.14E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.51E-05 | 0 |
V/L | rs781692388 | -0.509 | 0.071 | D | 0.315 | 0.33 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs781692388 | -0.509 | 0.071 | D | 0.315 | 0.33 | None | gnomAD-4.0.0 | 3.86317E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.19094E-05 | 0 | 1.60834E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6335 | likely_pathogenic | 0.6995 | pathogenic | -2.151 | Highly Destabilizing | 0.98 | D | 0.689 | prob.neutral | N | 0.517253091 | None | None | N |
V/C | 0.9581 | likely_pathogenic | 0.9695 | pathogenic | -1.856 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
V/D | 0.9923 | likely_pathogenic | 0.9947 | pathogenic | -2.319 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | D | 0.597605669 | None | None | N |
V/E | 0.9813 | likely_pathogenic | 0.986 | pathogenic | -2.129 | Highly Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
V/F | 0.6323 | likely_pathogenic | 0.671 | pathogenic | -1.31 | Destabilizing | 0.151 | N | 0.505 | neutral | D | 0.566152718 | None | None | N |
V/G | 0.775 | likely_pathogenic | 0.8161 | pathogenic | -2.664 | Highly Destabilizing | 0.998 | D | 0.843 | deleterious | D | 0.604338444 | None | None | N |
V/H | 0.994 | likely_pathogenic | 0.9958 | pathogenic | -2.219 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/I | 0.1087 | likely_benign | 0.118 | benign | -0.732 | Destabilizing | 0.835 | D | 0.644 | neutral | N | 0.511863127 | None | None | N |
V/K | 0.9892 | likely_pathogenic | 0.9919 | pathogenic | -1.675 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
V/L | 0.5279 | ambiguous | 0.5707 | pathogenic | -0.732 | Destabilizing | 0.071 | N | 0.315 | neutral | D | 0.572427227 | None | None | N |
V/M | 0.5675 | likely_pathogenic | 0.6322 | pathogenic | -0.87 | Destabilizing | 0.991 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/N | 0.9761 | likely_pathogenic | 0.9834 | pathogenic | -1.908 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
V/P | 0.9881 | likely_pathogenic | 0.99 | pathogenic | -1.177 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
V/Q | 0.9822 | likely_pathogenic | 0.9856 | pathogenic | -1.805 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.9754 | likely_pathogenic | 0.9803 | pathogenic | -1.454 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
V/S | 0.892 | likely_pathogenic | 0.924 | pathogenic | -2.619 | Highly Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
V/T | 0.7957 | likely_pathogenic | 0.8405 | pathogenic | -2.284 | Highly Destabilizing | 0.985 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/W | 0.991 | likely_pathogenic | 0.9931 | pathogenic | -1.688 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/Y | 0.9486 | likely_pathogenic | 0.9582 | pathogenic | -1.359 | Destabilizing | 0.983 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.