Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8954 | 27085;27086;27087 | chr2:178713274;178713273;178713272 | chr2:179578001;179578000;179577999 |
N2AB | 8637 | 26134;26135;26136 | chr2:178713274;178713273;178713272 | chr2:179578001;179578000;179577999 |
N2A | 7710 | 23353;23354;23355 | chr2:178713274;178713273;178713272 | chr2:179578001;179578000;179577999 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs752903252 | 0.046 | 0.999 | N | 0.667 | 0.403 | 0.724535380459 | gnomAD-2.1.1 | 4.12E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.72E-05 | None | 0 | None | 0 | 0 | 0 |
P/L | rs752903252 | 0.046 | 0.999 | N | 0.667 | 0.403 | 0.724535380459 | gnomAD-4.0.0 | 2.74301E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.58112E-05 | None | 0 | 0 | 9.00807E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2483 | likely_benign | 0.3498 | ambiguous | -0.37 | Destabilizing | 0.992 | D | 0.629 | neutral | N | 0.472971091 | None | None | I |
P/C | 0.8573 | likely_pathogenic | 0.9177 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
P/D | 0.7492 | likely_pathogenic | 0.8271 | pathogenic | -0.29 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
P/E | 0.609 | likely_pathogenic | 0.7175 | pathogenic | -0.412 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | I |
P/F | 0.8166 | likely_pathogenic | 0.8947 | pathogenic | -0.695 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
P/G | 0.6573 | likely_pathogenic | 0.7629 | pathogenic | -0.461 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
P/H | 0.5513 | ambiguous | 0.6764 | pathogenic | -0.075 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
P/I | 0.6513 | likely_pathogenic | 0.7744 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/K | 0.6689 | likely_pathogenic | 0.7896 | pathogenic | -0.395 | Destabilizing | 0.833 | D | 0.433 | neutral | None | None | None | None | I |
P/L | 0.3511 | ambiguous | 0.4839 | ambiguous | -0.283 | Destabilizing | 0.999 | D | 0.667 | neutral | N | 0.507065022 | None | None | I |
P/M | 0.634 | likely_pathogenic | 0.7525 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
P/N | 0.6868 | likely_pathogenic | 0.7861 | pathogenic | -0.157 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | I |
P/Q | 0.4526 | ambiguous | 0.5841 | pathogenic | -0.391 | Destabilizing | 0.998 | D | 0.627 | neutral | N | 0.49321029 | None | None | I |
P/R | 0.4749 | ambiguous | 0.6259 | pathogenic | 0.09 | Stabilizing | 0.995 | D | 0.663 | neutral | N | 0.489017978 | None | None | I |
P/S | 0.3891 | ambiguous | 0.5224 | ambiguous | -0.475 | Destabilizing | 0.998 | D | 0.618 | neutral | N | 0.46829599 | None | None | I |
P/T | 0.3349 | likely_benign | 0.4541 | ambiguous | -0.501 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.436626288 | None | None | I |
P/V | 0.4836 | ambiguous | 0.619 | pathogenic | -0.28 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | I |
P/W | 0.9189 | likely_pathogenic | 0.9559 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
P/Y | 0.7942 | likely_pathogenic | 0.876 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.