Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8961 | 27106;27107;27108 | chr2:178713253;178713252;178713251 | chr2:179577980;179577979;179577978 |
N2AB | 8644 | 26155;26156;26157 | chr2:178713253;178713252;178713251 | chr2:179577980;179577979;179577978 |
N2A | 7717 | 23374;23375;23376 | chr2:178713253;178713252;178713251 | chr2:179577980;179577979;179577978 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 0.975 | N | 0.657 | 0.304 | 0.294918367191 | gnomAD-4.0.0 | 6.84649E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99855E-07 | 0 | 0 |
H/R | rs766862084 | -1.345 | 0.006 | N | 0.222 | 0.154 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
H/R | rs766862084 | -1.345 | 0.006 | N | 0.222 | 0.154 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/R | rs766862084 | -1.345 | 0.006 | N | 0.222 | 0.154 | None | gnomAD-4.0.0 | 6.88266E-05 | None | None | None | None | N | None | 1.33511E-05 | 1.67056E-05 | None | 0 | 0 | None | 0 | 0 | 7.63162E-05 | 1.32045E-04 | 1.1214E-04 |
H/Y | rs2076926371 | None | 0.002 | N | 0.219 | 0.111 | 0.139678290688 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | rs2076926371 | None | 0.002 | N | 0.219 | 0.111 | 0.139678290688 | gnomAD-4.0.0 | 6.57566E-06 | None | None | None | None | N | None | 2.41523E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5266 | ambiguous | 0.5874 | pathogenic | -1.479 | Destabilizing | 0.495 | N | 0.47 | neutral | None | None | None | None | N |
H/C | 0.2093 | likely_benign | 0.2583 | benign | -0.89 | Destabilizing | 0.995 | D | 0.656 | neutral | None | None | None | None | N |
H/D | 0.6078 | likely_pathogenic | 0.696 | pathogenic | -1.229 | Destabilizing | 0.784 | D | 0.559 | neutral | N | 0.481354013 | None | None | N |
H/E | 0.4845 | ambiguous | 0.5673 | pathogenic | -1.049 | Destabilizing | 0.495 | N | 0.424 | neutral | None | None | None | None | N |
H/F | 0.3554 | ambiguous | 0.392 | ambiguous | 0.112 | Stabilizing | 0.007 | N | 0.333 | neutral | None | None | None | None | N |
H/G | 0.5991 | likely_pathogenic | 0.6724 | pathogenic | -1.903 | Destabilizing | 0.665 | D | 0.524 | neutral | None | None | None | None | N |
H/I | 0.4509 | ambiguous | 0.5133 | ambiguous | -0.243 | Destabilizing | 0.543 | D | 0.649 | neutral | None | None | None | None | N |
H/K | 0.2124 | likely_benign | 0.2415 | benign | -0.793 | Destabilizing | 0.013 | N | 0.293 | neutral | None | None | None | None | N |
H/L | 0.1604 | likely_benign | 0.181 | benign | -0.243 | Destabilizing | 0.27 | N | 0.497 | neutral | N | 0.453840172 | None | None | N |
H/M | 0.5948 | likely_pathogenic | 0.619 | pathogenic | -0.536 | Destabilizing | 0.944 | D | 0.623 | neutral | None | None | None | None | N |
H/N | 0.2818 | likely_benign | 0.352 | ambiguous | -1.387 | Destabilizing | 0.642 | D | 0.458 | neutral | N | 0.508368091 | None | None | N |
H/P | 0.7674 | likely_pathogenic | 0.8115 | pathogenic | -0.642 | Destabilizing | 0.975 | D | 0.657 | neutral | N | 0.489512971 | None | None | N |
H/Q | 0.1897 | likely_benign | 0.2219 | benign | -1.035 | Destabilizing | 0.642 | D | 0.499 | neutral | N | 0.485933948 | None | None | N |
H/R | 0.0765 | likely_benign | 0.0926 | benign | -0.932 | Destabilizing | 0.006 | N | 0.222 | neutral | N | 0.394733154 | None | None | N |
H/S | 0.4551 | ambiguous | 0.5224 | ambiguous | -1.609 | Destabilizing | 0.495 | N | 0.477 | neutral | None | None | None | None | N |
H/T | 0.5681 | likely_pathogenic | 0.6394 | pathogenic | -1.303 | Destabilizing | 0.828 | D | 0.567 | neutral | None | None | None | None | N |
H/V | 0.406 | ambiguous | 0.4543 | ambiguous | -0.642 | Destabilizing | 0.704 | D | 0.565 | neutral | None | None | None | None | N |
H/W | 0.3796 | ambiguous | 0.4038 | ambiguous | 0.657 | Stabilizing | 0.985 | D | 0.625 | neutral | None | None | None | None | N |
H/Y | 0.1208 | likely_benign | 0.1402 | benign | 0.599 | Stabilizing | 0.002 | N | 0.219 | neutral | N | 0.468521623 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.